qqman
The Manhattan-plot package for GWAS results, finished and dormant since 2017.
Comparison · Analytics
ggdemetra vs TwoSampleMR
A side-by-side editorial comparison of ggdemetra and TwoSampleMR — release velocity, themes, recent moves, and the top alternatives to consider.
ggdemetra vs TwoSampleMR: at a glance
What is ggdemetra?
A ggplot2 layer for seasonal adjustment output, filling in one plot type at a time.
ggdemetra is a thin, focused bridge: it puts RJDemetra's seasonal adjustment results — TRAMO-SEATS and X-13 models — into ggplot2 geoms and autoplot methods. Development runs in short bursts separated by long quiet stretches, and the most recent work has been correcting SI ratio handling rather than adding surface. The API is small enough that a single function rename counts as the notable change in a release.
What is TwoSampleMR?
The flagship Mendelian randomization package is auditing its own estimators, one bootstrap at a time.
TwoSampleMR is the MRC-IEU package for two-sample Mendelian randomization against OpenGWAS. Its 2026 releases are a sustained correctness review rather than feature work: 0.7.9 fixed bootstrap standard errors in mr_mode() and mr_rucker_bootstrap() that had been inflated since v0.6.30, and repaired two Rucker functions that were returning malformed objects. Point estimates were not affected by the bootstrap bug.
ggdemetra vs TwoSampleMR: editorial side-by-side
ggdemetra
0.0ANALYTICS
A ggplot2 layer for seasonal adjustment output, filling in one plot type at a time.
◆ Current state
ggdemetra is a thin, focused bridge: it puts RJDemetra's seasonal adjustment results — TRAMO-SEATS and X-13 models — into ggplot2 geoms and autoplot methods. Development runs in short bursts separated by long quiet stretches, and the most recent work has been correcting SI ratio handling rather than adding surface. The API is small enough that a single function rename counts as the notable change in a release.
◆ Where it's heading
The package has been steadily completing its coverage of the seasonal adjustment output surface: component extractors and autoplot methods in 0.2.3, SI ratio plotting in 0.2.5, then two releases of corrections to make SI ratios behave under TRAMO-SEATS jSA models and when no seasonal component is exported. Alongside that, the naming is being tidied — y_forecast() became raw(), and init_ggplot() shortened the setup boilerplate. This reads as a package approaching the edge of its intended scope and spending its effort on correctness.
◆ Prediction
Two consecutive releases fixing SI ratios under TRAMO-SEATS suggest that code path is the least settled part of the package, so further corrections there are the most likely next move. The entries give no indication of new model families or plot types being planned.
TwoSampleMR
0.0ANALYTICS
The flagship Mendelian randomization package is auditing its own estimators, one bootstrap at a time.
◆ Current state
TwoSampleMR is the MRC-IEU package for two-sample Mendelian randomization against OpenGWAS. Its 2026 releases are a sustained correctness review rather than feature work: 0.7.9 fixed bootstrap standard errors in mr_mode() and mr_rucker_bootstrap() that had been inflated since v0.6.30, and repaired two Rucker functions that were returning malformed objects. Point estimates were not affected by the bootstrap bug.
◆ Where it's heading
The pattern across these releases is a package being read line by line — a copy-paste weight vector in ldsc_rg(), chunking that produced zero splits for short SNP lists, penalisation recycled across the wrong SNPs, dead code paths removed, and regression tests added behind each fix. Alongside it runs a mechanical modernization pass: seq_len() for loop indices, tidyr in place of reshape2, current ggplot2 idioms, and the OpenGWAS URL migration. Feature work is limited to forest plot presentation.
◆ Prediction
Expect the audit to continue through the remaining bootstrap and jackknife routines, with releases staying in the 0.7.x patch range and each fix arriving with its own regression test.
Alternatives to ggdemetra and TwoSampleMR
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either ggdemetra or TwoSampleMR.
constants
The R package for CODATA constants rebuilt its symbol table on NIST's naming so future updates stop being hand work.
austraits
The R client for AusTraits spends its releases chasing the dataset it reads.
fossilsim
A fossil-record simulator that quietly grew a trait-evolution engine.
tern.rbmi
Reference-based multiple imputation tables, shipping only what CRAN checks demand.
tern.mmrm
An MMRM tabulation package that has published nothing since its 2024 CRAN releases.
See all ggdemetra alternatives → · See all TwoSampleMR alternatives →
Recent activity from ggdemetra and TwoSampleMR
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1mo agoTwoSampleMRBootstrap standard errors corrected in mode and Rucker estimators
- 2mo agoTwoSampleMRWrong weight vector and chunking fixes across the estimator set
- 2mo agoTwoSampleMRDeprecated ggplot2 idioms and dead code removed
- 3mo agoTwoSampleMROpenGWAS URLs migrated and Wald ratio warnings quieted
- 4mo agoTwoSampleMRCategorized forest plots aligned with the published figures
- 4mo agoTwoSampleMRFurther internal code optimizations
- 2y agoggdemetrasiratio() fix when TRAMO-SEATS exports no seasonal component
- 2y agoggdemetraraw() replaces y_forecast(); new init_ggplot() helper
- 2y agoggdemetraRe-tagged moments later as 0.2.7
- 3y agoggdemetraSI ratio plotting functions land
- 5y agoggdemetrats2df() conversion helper and geom_outlier date fix
- 6y agoggdemetrageom_arima no longer recomputes the model
Frequently asked questions
What is the difference between ggdemetra and TwoSampleMR?
They serve adjacent needs but don't currently overlap on shipped themes. ggdemetra and TwoSampleMR are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is ggdemetra better than TwoSampleMR?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. ggdemetra and TwoSampleMR are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to ggdemetra?
Top ggdemetra alternatives in Analytics are ranked by recent ship velocity. Browse the "ggdemetra alternatives" section above for the current picks, or visit /alternatives/ggdemetra for the full list with editorial commentary on each.
What are the best alternatives to TwoSampleMR?
Top TwoSampleMR alternatives in Analytics are ranked by recent ship velocity. Browse the "TwoSampleMR alternatives" section above for the current picks, or visit /alternatives/twosamplemr for the full list with editorial commentary on each.