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Comparison · Analytics
qtl vs tmap
A side-by-side editorial comparison of qtl and tmap — release velocity, themes, recent moves, and the top alternatives to consider.
qtl vs tmap: at a glance
What is qtl?
R/qtl is in pure custodial mode: every recent release answers a compiler, not a user
R/qtl is the long-established R package for QTL mapping in experimental crosses, covering interval mapping, composite interval mapping, multiple-QTL model fitting and the associated cross data formats. Nothing in the recent release history adds capability. Version 1.74 removes an include that started warning on CRAN, 1.72 improves an error message in cim(), and 1.70 migrates the C code from Calloc/Realloc/Free to their R_-prefixed equivalents for R-devel.
What is tmap?
Two years after a from-scratch rewrite, tmap is filling in the layers v4 promised.
tmap draws thematic maps in R across static and interactive modes. The 4.0 rewrite replaced the layer syntax with explicit visual variables, scales, legends and charts, and opened the package to extensions; the 4.x line since has been steady capability fill-in. The 4.4 release adds tm_circles with fixed unit-based radii, a blend argument on every layer, and hitboxes so small objects stay clickable in view mode.
qtl vs tmap: editorial side-by-side
qtl
0.0ANALYTICS
R/qtl is in pure custodial mode: every recent release answers a compiler, not a user
◆ Current state
R/qtl is the long-established R package for QTL mapping in experimental crosses, covering interval mapping, composite interval mapping, multiple-QTL model fitting and the associated cross data formats. Nothing in the recent release history adds capability. Version 1.74 removes an include that started warning on CRAN, 1.72 improves an error message in cim(), and 1.70 migrates the C code from Calloc/Realloc/Free to their R_-prefixed equivalents for R-devel.
◆ Where it's heading
The package is being maintained, not developed. The work divides cleanly into keeping the compiled code building against successive R and toolchain versions, and fixing narrow bugs reported through the issue tracker. The C-level migrations in particular are compliance with R's tightening of its C interface rather than anything chosen. Users should read the stability as maturity: the analysis surface has been fixed for years and the maintainer is keeping it installable.
◆ Prediction
R has continued to restrict its non-API C entry points, and this package has already made two such migrations, so further compile-time compliance work is the most likely content of the next release.
tmap
0.0ANALYTICS
Two years after a from-scratch rewrite, tmap is filling in the layers v4 promised.
◆ Current state
tmap draws thematic maps in R across static and interactive modes. The 4.0 rewrite replaced the layer syntax with explicit visual variables, scales, legends and charts, and opened the package to extensions; the 4.x line since has been steady capability fill-in. The 4.4 release adds tm_circles with fixed unit-based radii, a blend argument on every layer, and hitboxes so small objects stay clickable in view mode.
◆ Where it's heading
The extension mechanism introduced in 4.0 is where the interesting work is migrating: PMTiles support arrived through a separate experimental tmap.sources package, mode cycling became configurable via tmap_mode_pool() so packages like tmap.mapgl can register themselves, and shiny dispatch methods were added specifically to let other modes integrate. The core package is increasingly a rendering contract that satellite packages plug into.
◆ Prediction
Expect more rendering backends to land as sibling packages rather than in tmap itself, with the core continuing to absorb the dispatch and mode-management plumbing they need.
Alternatives to qtl and tmap
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either qtl or tmap.
parallelDist
parallelDist is in pure preservation mode — one build fix every few years.
cairo
Cairo finally catches R's graphics engine, all the way to GE API 16.
rjdqa
rjdqa keeps refining one screen: the seasonal adjustment quality dashboard
epikit
epikit narrows to field-epidemiology helpers, handing proportions to a sibling package
SimInf
SimInf 10.0 turns an epidemic simulator into a tool that fits models to real time series
Recent activity from qtl and tmap
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1mo agotmapDocumentation-only patch tidying man-page titles
- 1mo agotmaptm_circles, layer blending and clickable small objects
- 8mo agoqtlRemove R_ext/PrtUtil.h include flagged by CRAN
- 8mo agoqtlClearer cim() error when multiple phenotypes are passed
- 1y agotmaptmap v4 rewritten from scratch with a new layer syntax ⚡
- 1y agotmapFinal 3.x release before the v4 rewrite
- 1y agoqtlC memory calls migrated to R_Calloc/R_Realloc/R_Free
- 2y agoqtlFix Rprintf call and remaining compiler warnings
- 2y agoqtlFix summary.scanone() thresholds and csvs phenotype reading
- 3y agoqtlFix addint()/addcovarint() with X chromosome QTL and missing phenotypes
Frequently asked questions
What is the difference between qtl and tmap?
They serve adjacent needs but don't currently overlap on shipped themes. qtl and tmap are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is qtl better than tmap?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. qtl and tmap are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to qtl?
Top qtl alternatives in Analytics are ranked by recent ship velocity. Browse the "qtl alternatives" section above for the current picks, or visit /alternatives/qtl-r for the full list with editorial commentary on each.
What are the best alternatives to tmap?
Top tmap alternatives in Analytics are ranked by recent ship velocity. Browse the "tmap alternatives" section above for the current picks, or visit /alternatives/tmap-r for the full list with editorial commentary on each.