tern.rbmi
Reference-based multiple imputation tables, shipping only what CRAN checks demand.
Comparison · Analytics
geodist vs protr
A side-by-side editorial comparison of geodist and protr — release velocity, themes, recent moves, and the top alternatives to consider.
geodist vs protr: at a glance
What is geodist?
geodist stays dependency-free and fast, and warns you when 'cheap' distances stop being honest.
geodist computes geodesic distances between coordinate pairs in C with no dependencies, offering several measures that trade accuracy for speed — including a 'cheap' approximation used by default. The API is small and largely finished; 0.1.0 added geodist_min() for nearest-match lookups and 0.1.1 is a compiler warning fix.
What is protr?
protr's feature set is finished; the work now is surviving Bioconductor's churn.
protr generates numerical descriptors from protein sequences for machine learning, plus alignment-based similarity between sequences. The descriptor functions have been stable for years. Recent releases divide cleanly into two kinds: extending the similarity computations to work under memory constraints, and absorbing the Bioconductor split that moved pairwise alignment out of Biostrings into pwalign.
geodist vs protr: editorial side-by-side
geodist
0.0ANALYTICS
geodist stays dependency-free and fast, and warns you when 'cheap' distances stop being honest.
◆ Current state
geodist computes geodesic distances between coordinate pairs in C with no dependencies, offering several measures that trade accuracy for speed — including a 'cheap' approximation used by default. The API is small and largely finished; 0.1.0 added geodist_min() for nearest-match lookups and 0.1.1 is a compiler warning fix.
◆ Where it's heading
Development has been about making the speed-accuracy trade visible rather than hiding it. The 0.0.6 release added messages telling users to pick a different measure once the default cheap approximation is applied beyond 100km, where its error stops being negligible. Around that, the work is input handling — tibble support, better lon/lat column matching, vector inputs — and hardening the C code. It is a package that treats being small and correct as the feature.
◆ Prediction
Expect continued low-frequency maintenance: compiler warnings and geodesic source updates account for three of the last six releases, and the function surface has grown by only two entries in five years.
protr
0.0ANALYTICS
protr's feature set is finished; the work now is surviving Bioconductor's churn.
◆ Current state
protr generates numerical descriptors from protein sequences for machine learning, plus alignment-based similarity between sequences. The descriptor functions have been stable for years. Recent releases divide cleanly into two kinds: extending the similarity computations to work under memory constraints, and absorbing the Bioconductor split that moved pairwise alignment out of Biostrings into pwalign.
◆ Where it's heading
The similarity side is where the remaining engineering goes, and it follows a consistent pattern — whatever parSeqSim() gained, crossSetSim() eventually gets. Batching, verbose progress and a disk-backed variant all arrived for the single-set case first and were mirrored for the cross-set case in 1.7-1. That is a maintainer closing feature-parity gaps rather than opening new directions, and the two most recent releases contain no user-facing change at all.
◆ Prediction
Expect the next release to react to another Bioconductor or R CMD check change, which accounts for three of the last four. The similarity functions now have parity, so there is no obvious internal backlog left.
Alternatives to geodist and protr
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either geodist or protr.
tern.mmrm
An MMRM tabulation package that has published nothing since its 2024 CRAN releases.
ggmagnify
A single-purpose ggplot2 inset tool, refining the same three arguments.
symengine
An R symbolic-maths binding whose changelog is really the C++ core's release notes.
gtfstools
gtfstools stopped guarding its own object model and started accepting everyone else's.
quantities
The glue package that makes R carry units and uncertainty through the same calculation.
See all geodist alternatives → · See all protr alternatives →
Recent activity from geodist and protr
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 11mo agoprotrprotr 1.7-5 silences a Debian r-devel check note
- 1y agogeodistgeodist 0.1.1 clears a clang warning in geodesic.c
- 1y agoprotrprotr 1.7-4 checks alignment dependencies upfront
- 1y agoprotrprotr 1.7-3 detects Biostrings version to find pwalign
- 2y agoprotrprotr 1.7-2 fixes citation key and vignette accessibility
- 2y agoprotrprotr 1.7-1 brings crossSetSim to parity with parSeqSim
- 2y agogeodistgeodist 0.1.0 adds geodist_min() for nearest matches
- 2y agoprotrprotr 1.7-0 adds crossSetSim for two-set similarity
- 3y agogeodistgeodist 0.0.8 updates geodesic source, fixes clang warnings
- 5y agogeodistgeodist 0.0.7 improves lon/lat column matching and tibbles
- 5y agogeodistgeodist 0.0.6 warns when cheap distances exceed 100km
- 6y agogeodistgeodist 0.0.4 adds geodist_vec() for vector inputs
Frequently asked questions
What is the difference between geodist and protr?
They serve adjacent needs but don't currently overlap on shipped themes. geodist and protr are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is geodist better than protr?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. geodist and protr are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to geodist?
Top geodist alternatives in Analytics are ranked by recent ship velocity. Browse the "geodist alternatives" section above for the current picks, or visit /alternatives/geodist-r for the full list with editorial commentary on each.
What are the best alternatives to protr?
Top protr alternatives in Analytics are ranked by recent ship velocity. Browse the "protr alternatives" section above for the current picks, or visit /alternatives/protr-r for the full list with editorial commentary on each.