qqman
The Manhattan-plot package for GWAS results, finished and dormant since 2017.
Comparison · Analytics
ggmagnify vs protr
A side-by-side editorial comparison of ggmagnify and protr — release velocity, themes, recent moves, and the top alternatives to consider.
ggmagnify vs protr: at a glance
What is ggmagnify?
A single-purpose ggplot2 inset tool, refining the same three arguments.
ggmagnify draws magnified insets of a region of a ggplot, with projection lines connecting the inset to its source area. The visible releases are all small refinements to how that inset looks — corner radius, fill between projection lines — plus one fix for inset themes being overridden. There are only three entries, so the picture is necessarily partial.
What is protr?
protr's feature set is finished; the work now is surviving Bioconductor's churn.
protr generates numerical descriptors from protein sequences for machine learning, plus alignment-based similarity between sequences. The descriptor functions have been stable for years. Recent releases divide cleanly into two kinds: extending the similarity computations to work under memory constraints, and absorbing the Bioconductor split that moved pairwise alignment out of Biostrings into pwalign.
ggmagnify vs protr: editorial side-by-side
ggmagnify
0.0ANALYTICS
A single-purpose ggplot2 inset tool, refining the same three arguments.
◆ Current state
ggmagnify draws magnified insets of a region of a ggplot, with projection lines connecting the inset to its source area. The visible releases are all small refinements to how that inset looks — corner radius, fill between projection lines — plus one fix for inset themes being overridden. There are only three entries, so the picture is necessarily partial.
◆ Where it's heading
Work concentrates on the visual finish of the inset rather than on new capability, which is what a package with one job should look like. Two feature releases a week apart in early 2024 suggest a short burst of attention rather than sustained development, and the feed goes quiet after mid-2024.
◆ Prediction
Too few entries to call a direction with confidence; continued small styling arguments would be consistent with what is visible.
protr
0.0ANALYTICS
protr's feature set is finished; the work now is surviving Bioconductor's churn.
◆ Current state
protr generates numerical descriptors from protein sequences for machine learning, plus alignment-based similarity between sequences. The descriptor functions have been stable for years. Recent releases divide cleanly into two kinds: extending the similarity computations to work under memory constraints, and absorbing the Bioconductor split that moved pairwise alignment out of Biostrings into pwalign.
◆ Where it's heading
The similarity side is where the remaining engineering goes, and it follows a consistent pattern — whatever parSeqSim() gained, crossSetSim() eventually gets. Batching, verbose progress and a disk-backed variant all arrived for the single-set case first and were mirrored for the cross-set case in 1.7-1. That is a maintainer closing feature-parity gaps rather than opening new directions, and the two most recent releases contain no user-facing change at all.
◆ Prediction
Expect the next release to react to another Bioconductor or R CMD check change, which accounts for three of the last four. The similarity functions now have parity, so there is no obvious internal backlog left.
Alternatives to ggmagnify and protr
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either ggmagnify or protr.
constants
The R package for CODATA constants rebuilt its symbol table on NIST's naming so future updates stop being hand work.
austraits
The R client for AusTraits spends its releases chasing the dataset it reads.
ggdemetra
A ggplot2 layer for seasonal adjustment output, filling in one plot type at a time.
fossilsim
A fossil-record simulator that quietly grew a trait-evolution engine.
tern.rbmi
Reference-based multiple imputation tables, shipping only what CRAN checks demand.
See all ggmagnify alternatives → · See all protr alternatives →
Recent activity from ggmagnify and protr
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 11mo agoprotrprotr 1.7-5 silences a Debian r-devel check note
- 1y agoprotrprotr 1.7-4 checks alignment dependencies upfront
- 1y agoprotrprotr 1.7-3 detects Biostrings version to find pwalign
- 2y agoprotrprotr 1.7-2 fixes citation key and vignette accessibility
- 2y agoprotrprotr 1.7-1 brings crossSetSim to parity with parSeqSim
- 2y agoggmagnifyFixes inset theme override on supplied plots
- 2y agoggmagnifyAdds fill between projection lines
- 2y agoggmagnifyAdds corner radius for target and inset
- 2y agoprotrprotr 1.7-0 adds crossSetSim for two-set similarity
Frequently asked questions
What is the difference between ggmagnify and protr?
They serve adjacent needs but don't currently overlap on shipped themes. ggmagnify and protr are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is ggmagnify better than protr?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. ggmagnify and protr are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to ggmagnify?
Top ggmagnify alternatives in Analytics are ranked by recent ship velocity. Browse the "ggmagnify alternatives" section above for the current picks, or visit /alternatives/ggmagnify for the full list with editorial commentary on each.
What are the best alternatives to protr?
Top protr alternatives in Analytics are ranked by recent ship velocity. Browse the "protr alternatives" section above for the current picks, or visit /alternatives/protr-r for the full list with editorial commentary on each.