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Comparison · Infra & APIs

onemap vs xpose4

A side-by-side editorial comparison of onemap and xpose4 — release velocity, themes, recent moves, and the top alternatives to consider.

onemap vs xpose4: at a glance

Featureonemapxpose4
SectorInfra & APIsInfra & APIs
Velocity score0.00.0
Sparks · 30d00
Top themesgenetic-mapping, linkage-analysis, genotyping-by-sequencing, mappolypharmacometrics, nonmem, model-diagnostics, compatibility
Last editorial update1h ago2h ago
WebsiteVisit →Visit →

What is onemap?

A genetic-mapping mainstay that now points new users toward MAPpoly at load time

OneMap constructs genetic linkage maps for experimental crosses, and its 3.x line turned it into a hub in a wider mapping toolchain: export functions for VIEWpoly and QTLpoly, summary and interactive ordering functions adapted from MAPpoly, and retention of reference and alternative allele information from imported VCFs. The most recent release, 3.2.0 in January 2025, adds an announcement about MAPpoly to the README and the package load message, fixes a subscript-out-of-bounds warning in rf_2pts and refreshes vignettes and tests.

Read the full onemap trajectory →

What is xpose4?

NONMEM's veteran diagnostics package, now moving at about one fix a year

xpose4 generates diagnostic plots for nonlinear mixed-effect models fitted in NONMEM, a role it has held since 2014 when five packages were consolidated into one. The three most recent releases are a documentation cross-reference update, a change of the default table-reading method to the slower and more reliable one, and a set of file-parsing bug fixes. No new plot types appear anywhere in the window.

Read the full xpose4 trajectory →

onemap vs xpose4: editorial side-by-side

O
onemap
INFRA · APIS
0.0

A genetic-mapping mainstay that now points new users toward MAPpoly at load time

◆ Current state

OneMap constructs genetic linkage maps for experimental crosses, and its 3.x line turned it into a hub in a wider mapping toolchain: export functions for VIEWpoly and QTLpoly, summary and interactive ordering functions adapted from MAPpoly, and retention of reference and alternative allele information from imported VCFs. The most recent release, 3.2.0 in January 2025, adds an announcement about MAPpoly to the README and the package load message, fixes a subscript-out-of-bounds warning in rf_2pts and refreshes vignettes and tests.

◆ Where it's heading

Versions 3.0.0 and 3.1.0 were driven by a benchmarking preprint on genotyping-by-sequencing best practice, and their content follows directly: marker filtering from two-point estimates, memory reduction after filtering, and optimisation of find_bins and map_avoid_unlinked. What has happened since is signposting rather than capability — a package that spent two releases integrating with MAPpoly now tells users about it every time it loads. The pre-3.0 tags are backfilled, with versions 2.3 through 2.7 sharing a single August 2021 timestamp, so their order carries no information.

◆ Prediction

The load-message announcement suggests attention is flowing toward the MAPpoly side of the toolchain; expect maintenance and compatibility releases here rather than new mapping algorithms.

X
xpose4
INFRA · APIS
0.0

NONMEM's veteran diagnostics package, now moving at about one fix a year

◆ Current state

xpose4 generates diagnostic plots for nonlinear mixed-effect models fitted in NONMEM, a role it has held since 2014 when five packages were consolidated into one. The three most recent releases are a documentation cross-reference update, a change of the default table-reading method to the slower and more reliable one, and a set of file-parsing bug fixes. No new plot types appear anywhere in the window.

◆ Where it's heading

Development now responds to the R ecosystem rather than to pharmacometrics: deprecated dplyr and tibble calls, readr and gam changes, and R documentation standards account for most recent entries. The last release with visible new capability is 4.6.0 in 2017, which extended xpose.VPC() with outlier identification, median-positioned lines and bin rugs. The feed's older tags are also unreliable — versions 4.5.0 through 4.5.3 all carry the same 2014 timestamp, so their order says nothing about sequence.

◆ Prediction

Expect continued compatibility maintenance at roughly one release a year, triggered by changes in R or in the packages it reads tables with; nothing in these entries points to new diagnostic capability being planned.

Alternatives to onemap and xpose4

Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either onemap or xpose4.

See all onemap alternatives → · See all xpose4 alternatives →

Recent activity from onemap and xpose4

Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.

  1. 11mo agoxpose4Documentation cross-references updated to R standards
  2. 1y agoonemapMAPpoly announcement added to README and load message
  3. 3y agoonemapExports to VIEWpoly and QTLpoly; marker ordering and map summaries
  4. 3y agoonemapTwo-point marker filtering and memory reduction
  5. 4y agoxpose4Default table reading switched to the 'slow' method
  6. 4y agoonemapPSOCK and FORK parallelization choice; vcfR as an import
  7. 5y agoonemaphmm=FALSE option for ordering algorithms
  8. 5y agoonemapMDSMap dependency removed
  9. 5y agoxpose4Fixes for -99 row filtering, catab/cotab covariates and CSV import
  10. 6y agoxpose4Adjustable censored-line length in kaplan.plot()
  11. 8y agoxpose4Compliance updates for readr and gam changes
  12. 9y agoxpose4VPC outlier identification, median lines and bin rugs

Frequently asked questions

What is the difference between onemap and xpose4?

They serve adjacent needs but don't currently overlap on shipped themes. onemap and xpose4 are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.

Is onemap better than xpose4?

Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. onemap and xpose4 are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.

What are the best alternatives to onemap?

Top onemap alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "onemap alternatives" section above for the current picks, or visit /alternatives/onemap for the full list with editorial commentary on each.

What are the best alternatives to xpose4?

Top xpose4 alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "xpose4 alternatives" section above for the current picks, or visit /alternatives/xpose4 for the full list with editorial commentary on each.