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Comparison · Analytics
lobstr vs serofoi
A side-by-side editorial comparison of lobstr and serofoi — release velocity, themes, recent moves, and the top alternatives to consider.
lobstr vs serofoi: at a glance
What is lobstr?
R's object inspector is losing its view of the internals as CRAN closes off the private C API.
lobstr exposes R's internal object representation — sizes, addresses, reference counts, abstract syntax trees. Its two most recent releases are both driven by R's move to a restricted public C API: 1.1.3 stopped reporting a vector's truelength and reworked the reference indicator into refs:n, and 1.2.0 changed what sxp(expand = "environment") shows in order to stay compliant. 1.2.0 also adds src() for exploring srcref objects.
What is serofoi?
serofoi grew a serosurvey simulator alongside the force-of-infection models it was built to fit.
serofoi estimates the force of infection from serological survey data using Bayesian serocatalytic models fitted through Stan. Beyond fitting it now simulates serosurveys — specifying a model and a survey design and generating the data such a survey would produce. The most recent release is visualisation and naming work.
lobstr vs serofoi: editorial side-by-side
lobstr
0.0ANALYTICS
R's object inspector is losing its view of the internals as CRAN closes off the private C API.
◆ Current state
lobstr exposes R's internal object representation — sizes, addresses, reference counts, abstract syntax trees. Its two most recent releases are both driven by R's move to a restricted public C API: 1.1.3 stopped reporting a vector's truelength and reworked the reference indicator into refs:n, and 1.2.0 changed what sxp(expand = "environment") shows in order to stay compliant. 1.2.0 also adds src() for exploring srcref objects.
◆ Where it's heading
The package is being rebuilt inside a shrinking window of what R permits. Each release trades some introspection depth for API conformance while trying to keep the diagnostic value intact — showing promise expressions instead of internal frame structures, replacing named with a documented refs scale. Where the constraint does not bite, development continues normally: src() is genuinely new, and the environment-binding fixes remove long-standing errors on for-loop and immediate bindings.
◆ Prediction
Expect further conformance work, since the notes describe it as ongoing, with any remaining non-API-dependent readouts either reworked or dropped as R tightens further.
serofoi
0.0ANALYTICS
serofoi grew a serosurvey simulator alongside the force-of-infection models it was built to fit.
◆ Current state
serofoi estimates the force of infection from serological survey data using Bayesian serocatalytic models fitted through Stan. Beyond fitting it now simulates serosurveys — specifying a model and a survey design and generating the data such a survey would produce. The most recent release is visualisation and naming work.
◆ Where it's heading
The package moved from fitting-only to a fit-and-simulate pair. 0.1.0 added simulation from time- or age-varying force-of-infection trends and simplified the fitted object down to a Stan fit; 1.0.2 broadened simulation into full serosurvey generation with its own vignette. 1.0.3 then spent its effort on naming consistency and plotting options, which is what a package does once its scope is set.
◆ Prediction
With simulation and fitting both in place, the natural next step is tooling that closes the loop between them — recovery checks or study-design guidance built on simulated surveys.
Alternatives to lobstr and serofoi
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either lobstr or serofoi.
sftime
The spatiotemporal companion to sf, moving at the pace of the packages around it.
ReLTER
An interface to Europe's long-term ecosystem research network that went quiet after 2.0.
waywiser
Spatial model assessment that spent the last year on cross-platform arithmetic and CRAN rules.
taxizedb
Stopped trusting the cloud to prepare its taxonomic databases and does the conversion locally.
fellingdater
Went from estimating felling dates to doing the crossdating that produces them.
See all lobstr alternatives → · See all serofoi alternatives →
Recent activity from lobstr and serofoi
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 5mo agolobstrNew src() for srcrefs; environment bindings stop erroring
- 9mo agolobstrtruelength reporting dropped for public C API compliance ⚡
- 1y agoserofoiConstant FoI plots, r-hat plotting and shorter parameter names
- 1y agoserofoiSerological surveys can now be simulated end to end
- 2y agoserofoiSimulation functions added; fitted output simplified to a Stan fit
- 3y agoserofoiFirst release: three force-of-infection models and the core modules
- 4y agolobstrMoves to cpp11, relicensed MIT, adds experimental tree()
- 7y agolobstrPROTECT error fixed
- 7y agolobstrALTREP sizes computed correctly; obj_addr() stops side-effecting
Frequently asked questions
What is the difference between lobstr and serofoi?
They serve adjacent needs but don't currently overlap on shipped themes. lobstr and serofoi are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is lobstr better than serofoi?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. lobstr and serofoi are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to lobstr?
Top lobstr alternatives in Analytics are ranked by recent ship velocity. Browse the "lobstr alternatives" section above for the current picks, or visit /alternatives/lobstr for the full list with editorial commentary on each.
What are the best alternatives to serofoi?
Top serofoi alternatives in Analytics are ranked by recent ship velocity. Browse the "serofoi alternatives" section above for the current picks, or visit /alternatives/serofoi for the full list with editorial commentary on each.