OHPL
A 2017 chemometrics method frozen in place, visited only when CRAN changes its documentation rules.
Comparison · Analytics
hstats vs vegan
A side-by-side editorial comparison of hstats and vegan — release velocity, themes, recent moves, and the top alternatives to consider.
hstats vs vegan: at a glance
What is hstats?
hstats settled into maintenance after its 1.0 restructuring, with model coverage the only thing still growing.
hstats computes Friedman's H-statistics, partial dependence, ICE curves and permutation importance for any model exposing a prediction function. The releases in view are consolidation: performance work on plain data.frames, ICE facetting for multioutput models, ranger survival support, and a ggplot 4.0 compatibility pass in 2025. The package moved to the ModelOriented organisation in 1.2.0.
What is vegan?
Community ecology's standard toolkit is retiring the functions a generation of scripts was built on.
vegan is the reference R package for ordination and diversity analysis in community ecology. The 2.7 line redesigned constrained ordination graphics from scratch, made adonis defunct in favor of adonis2, and moved permutation tests for partial RDA and db-RDA onto residualized predictors. The current 2.7-5 release is stabilization — parallel processing on Windows, ggvegan compatibility for tidy scores, and arrow label placement.
hstats vs vegan: editorial side-by-side
hstats
0.0ANALYTICS
hstats settled into maintenance after its 1.0 restructuring, with model coverage the only thing still growing.
◆ Current state
hstats computes Friedman's H-statistics, partial dependence, ICE curves and permutation importance for any model exposing a prediction function. The releases in view are consolidation: performance work on plain data.frames, ICE facetting for multioutput models, ranger survival support, and a ggplot 4.0 compatibility pass in 2025. The package moved to the ModelOriented organisation in 1.2.0.
◆ Where it's heading
The structural work — the hstats_matrix object, quantile approximation, revised plotting — landed in 1.0.0 just outside this window, and nothing since has changed the package's shape. What continues is model-coverage plumbing: mlr3 classification modes, ranger survival behind a survival argument, and factor predictions added in 1.1.0 then removed again in 1.2.0. The most recent releases are compatibility-driven, tracking ggplot2 rather than the interaction statistics.
◆ Prediction
Expect the next release to be another dependency-compatibility pass or a new model backend working out of the box, rather than new interaction statistics.
vegan
0.0ANALYTICS
Community ecology's standard toolkit is retiring the functions a generation of scripts was built on.
◆ Current state
vegan is the reference R package for ordination and diversity analysis in community ecology. The 2.7 line redesigned constrained ordination graphics from scratch, made adonis defunct in favor of adonis2, and moved permutation tests for partial RDA and db-RDA onto residualized predictors. The current 2.7-5 release is stabilization — parallel processing on Windows, ggvegan compatibility for tidy scores, and arrow label placement.
◆ Where it's heading
Two long deprecation programs are converging. Plotting is being pushed out of the package: lattice functions are deprecated in favor of ggplot2 equivalents now living in ggvegan, a separate CRAN package, while vegan's own base graphics were rebuilt around independently configurable score types and pipe-based construction. Meanwhile the statistical core is being made internally consistent — add1 and drop1 no longer use different internal models, and summary is no longer an accepted route to ordination scores.
◆ Prediction
Expect the remaining lattice functions to go defunct and more plotting responsibility to shift to ggvegan, leaving vegan as the statistical engine with a thin base graphics layer.
Alternatives to hstats and vegan
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either hstats or vegan.
fastplyr
A fast dplyr stand-in that keeps finding new places to skip work entirely.
trias
Belgium's invasive-species indicator toolkit is in steady refinement, one plotting edge case at a time.
icesSAG
The ICES stock assessment client took upload away in 2024 and spent two years giving it back.
dggridR
A discrete global grid generator grew cell traversal and became a usable spatial index.
ichimoku
A cloud-chart package quietly swapping its dependencies for its maintainer's own libraries.
See all hstats alternatives → · See all vegan alternatives →
Recent activity from hstats and vegan
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 2mo agoveganParallel processing stabilized, especially on Windows
- 5mo agoveganLattice plotting deprecated as ggvegan reaches CRAN
- 10mo agohstatsggplot 4.0 compatibility and test coverage
- 10mo agoveganPartial RDA permutation tests adopt residualized predictors
- 1y agoveganOrdination graphics rebuilt and adonis made defunct ⚡
- 1y agoveganRelease chasing undefined behavior in a C function
- 1y agoveganpca, ca and pco added for unconstrained ordination
- 1y agohstatsranger survival models supported out of the box
- 2y agohstatsMoves to ModelOriented; factor predictions removed
- 2y agohstatsICE facets for multioutput models; mlr3 fixes
- 2y agohstatsFaster data.frame paths; NaN H-statistics fixed
- 2y agohstatsFactor predictions and line-style 2D partial dependence
Frequently asked questions
What is the difference between hstats and vegan?
They serve adjacent needs but don't currently overlap on shipped themes. hstats and vegan are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is hstats better than vegan?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. hstats and vegan are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to hstats?
Top hstats alternatives in Analytics are ranked by recent ship velocity. Browse the "hstats alternatives" section above for the current picks, or visit /alternatives/hstats for the full list with editorial commentary on each.
What are the best alternatives to vegan?
Top vegan alternatives in Analytics are ranked by recent ship velocity. Browse the "vegan alternatives" section above for the current picks, or visit /alternatives/vegan-r for the full list with editorial commentary on each.