n2kanalysis
n2kanalysis has spent eight years wiring INLA models to an S3 bucket.
Comparison · Analytics
OHPL vs vegan
A side-by-side editorial comparison of OHPL and vegan — release velocity, themes, recent moves, and the top alternatives to consider.
OHPL vs vegan: at a glance
What is OHPL?
A 2017 chemometrics method frozen in place, visited only when CRAN changes its documentation rules.
OHPL implements ordered homogeneity pursuit lasso, a variable selection method for high-dimensional spectroscopic data that groups correlated predictors before applying a lasso. The functional package was complete by 1.2 in 2017, when prediction, performance evaluation and simulated data generation functions were added. Every release since has touched documentation and packaging only.
What is vegan?
Community ecology's standard toolkit is retiring the functions a generation of scripts was built on.
vegan is the reference R package for ordination and diversity analysis in community ecology. The 2.7 line redesigned constrained ordination graphics from scratch, made adonis defunct in favor of adonis2, and moved permutation tests for partial RDA and db-RDA onto residualized predictors. The current 2.7-5 release is stabilization — parallel processing on Windows, ggvegan compatibility for tidy scores, and arrow label placement.
OHPL vs vegan: editorial side-by-side
OHPL
0.0ANALYTICS
A 2017 chemometrics method frozen in place, visited only when CRAN changes its documentation rules.
◆ Current state
OHPL implements ordered homogeneity pursuit lasso, a variable selection method for high-dimensional spectroscopic data that groups correlated predictors before applying a lasso. The functional package was complete by 1.2 in 2017, when prediction, performance evaluation and simulated data generation functions were added. Every release since has touched documentation and packaging only.
◆ Where it's heading
This is a published-method package in the archival phase: the algorithm is fixed, the paper is cited, and the maintainer keeps it installable. The releases read as a timeline of R packaging conventions rather than of the method — tidyverse code style in 2019, roxygen2 Markdown and bibentry() in 2024, Rd HTML validation in 2026. Gaps of two to five years between releases are normal here.
◆ Prediction
Expect the next release whenever CRAN introduces another documentation or packaging check; there is no indication the method itself will be extended.
vegan
0.0ANALYTICS
Community ecology's standard toolkit is retiring the functions a generation of scripts was built on.
◆ Current state
vegan is the reference R package for ordination and diversity analysis in community ecology. The 2.7 line redesigned constrained ordination graphics from scratch, made adonis defunct in favor of adonis2, and moved permutation tests for partial RDA and db-RDA onto residualized predictors. The current 2.7-5 release is stabilization — parallel processing on Windows, ggvegan compatibility for tidy scores, and arrow label placement.
◆ Where it's heading
Two long deprecation programs are converging. Plotting is being pushed out of the package: lattice functions are deprecated in favor of ggplot2 equivalents now living in ggvegan, a separate CRAN package, while vegan's own base graphics were rebuilt around independently configurable score types and pipe-based construction. Meanwhile the statistical core is being made internally consistent — add1 and drop1 no longer use different internal models, and summary is no longer an accepted route to ordination scores.
◆ Prediction
Expect the remaining lattice functions to go defunct and more plotting responsibility to shift to ggvegan, leaving vegan as the statistical engine with a thin base graphics layer.
Alternatives to OHPL and vegan
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either OHPL or vegan.
n1qn1c
A Fortran-descended optimizer got thread-safe, then found two flags that never worked.
ggstatsplot
ggstatsplot reached 1.0 by adding tests, having outsourced its statistics years ago.
collapse
collapse got a JSS paper and a 7x fmean speedup in the same release.
gtsummary
gtsummary is quietly rebuilding itself around analysis results data, one table verb at a time.
broadcast
broadcast is filling in NumPy-style array broadcasting for R, operator by operator.
Recent activity from OHPL and vegan
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 2mo agoveganParallel processing stabilized, especially on Windows
- 4mo agoOHPLRd documentation HTML validation fixed
- 5mo agoveganLattice plotting deprecated as ggvegan reaches CRAN
- 10mo agoveganPartial RDA permutation tests adopt residualized predictors
- 1y agoveganOrdination graphics rebuilt and adonis made defunct ⚡
- 1y agoveganRelease chasing undefined behavior in a C function
- 1y agoveganpca, ca and pco added for unconstrained ordination
- 2y agoOHPLDocumentation modernized to current R conventions
- 7y agoOHPLCode restyled and repository links updated
- 9y agoOHPLCitation information and documentation site updated
- 9y agoOHPLPrediction and evaluation functions complete the package
Frequently asked questions
What is the difference between OHPL and vegan?
They serve adjacent needs but don't currently overlap on shipped themes. OHPL and vegan are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is OHPL better than vegan?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. OHPL and vegan are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to OHPL?
Top OHPL alternatives in Analytics are ranked by recent ship velocity. Browse the "OHPL alternatives" section above for the current picks, or visit /alternatives/ohpl for the full list with editorial commentary on each.
What are the best alternatives to vegan?
Top vegan alternatives in Analytics are ranked by recent ship velocity. Browse the "vegan alternatives" section above for the current picks, or visit /alternatives/vegan-r for the full list with editorial commentary on each.