pr2database
The protist reference database keeps widening past the rRNA gene it was built on.
Comparison · Infra & APIs
gofedf vs rsofun
A side-by-side editorial comparison of gofedf and rsofun — release velocity, themes, recent moves, and the top alternatives to consider.
gofedf vs rsofun: at a glance
What is gofedf?
A two-test goodness-of-fit package opens itself up to any weight function
gofedf runs goodness-of-fit tests built on the empirical distribution function. Its three releases trace a short, clean arc: existence in 2023, then p-values computed from an analytical solution of the integral equation in 2024, then in 2026 a user-supplied weight function that replaces the fixed menu. Cramer-von Mises and Anderson-Darling are now two points in a family rather than the two options.
What is rsofun?
An ecosystem model starts tracking carbon isotopes and land-use change.
rsofun wraps the P-model and BiomeE vegetation models in R with Fortran cores, covering photosynthesis, water balance and forest demography, plus Bayesian calibration. The 5.1.0 release is the first in the window to widen what the models simulate rather than reorganise them. Before it, the history is renaming, cost-function rewrites and output-format consistency work.
gofedf vs rsofun: editorial side-by-side
gofedf
0.0INFRA · APIS
A two-test goodness-of-fit package opens itself up to any weight function
◆ Current state
gofedf runs goodness-of-fit tests built on the empirical distribution function. Its three releases trace a short, clean arc: existence in 2023, then p-values computed from an analytical solution of the integral equation in 2024, then in 2026 a user-supplied weight function that replaces the fixed menu. Cramer-von Mises and Anderson-Darling are now two points in a family rather than the two options.
◆ Where it's heading
The package is generalising rather than accumulating. Each release removed a hard-coded decision: first how eigenvalues are computed, offering both the analytical route and a matrix approximation; then which weight function defines the statistic at all. The maintainer's own framing in 1.1.0 is a contrast against what earlier versions would not let you do, which is the shape of a package aiming to become a framework.
◆ Prediction
An arbitrary weight function is the extensibility point that matters for EDF tests; what it lacks is calibration guidance, since Type I error behaviour was the argued benefit of the analytical eigenvalue route. Documented recommendations or diagnostics for user-chosen weights are the natural follow-up, though the entries do not announce one.
rsofun
0.0INFRA · APIS
An ecosystem model starts tracking carbon isotopes and land-use change.
◆ Current state
rsofun wraps the P-model and BiomeE vegetation models in R with Fortran cores, covering photosynthesis, water balance and forest demography, plus Bayesian calibration. The 5.1.0 release is the first in the window to widen what the models simulate rather than reorganise them. Before it, the history is renaming, cost-function rewrites and output-format consistency work.
◆ Where it's heading
The direction is from a calibration harness toward a model that can answer different questions: isotope fractionation now comes out of the P-model, BiomeE handles land use and land-use change, and forcing can be recycled when a simulation outruns its data. Version stamps are unreliable here, with a v5.0 tag carrying only a build fix and predating v4.4, so the arc reads better through content than through numbering.
◆ Prediction
The isotope work is explicitly unfinished, with a constant atmospheric signature standing in for daily d13c forcing, so the next likely step is accepting that as model input.
Alternatives to gofedf and rsofun
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either gofedf or rsofun.
ggalign
Composable aligned layouts, rebuilt on S7 while ggplot2 4.0 lands underneath.
prioritizr
Conservation planning absorbs the literature's target-setting rules as code.
jSDM
Joint species distribution models in Gibbs-sampled C++, quiet since 2023.
usmap
Ten years in, US mapping splits its data out and finally adds Puerto Rico.
trackeR
Fitness-tracking analysis in slow maintenance, still absorbing upstream breakage.
See all gofedf alternatives → · See all rsofun alternatives →
Recent activity from gofedf and rsofun
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 4mo agogofedfUser-supplied weight functions for Cramer-von Mises tests ⚡
- 10mo agorsofunCarbon isotope tracking and LULUC support across both models ⚡
- 1y agogofedfp-values from an analytical eigenvalue solution
- 1y agorsofunLM3-PPA renamed BiomeE; cost function and stress functions rewritten
- 1y agorsofunParallel make fix on the v5.0 tag
- 2y agogofedfFirst release of the gofedf package ⚡
- 2y agorsofuncnmodel 0.1 research snapshot tag
- 4y agorsofunFortran crash guards and consistent P-model variable names
- 4y agorsofunPublic release following a code refactor
Frequently asked questions
What is the difference between gofedf and rsofun?
They serve adjacent needs but don't currently overlap on shipped themes. gofedf and rsofun are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is gofedf better than rsofun?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. gofedf and rsofun are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to gofedf?
Top gofedf alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "gofedf alternatives" section above for the current picks, or visit /alternatives/gofedf for the full list with editorial commentary on each.
What are the best alternatives to rsofun?
Top rsofun alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "rsofun alternatives" section above for the current picks, or visit /alternatives/rsofun for the full list with editorial commentary on each.