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Comparison · Analytics
geodist vs gwasvcf
A side-by-side editorial comparison of geodist and gwasvcf — release velocity, themes, recent moves, and the top alternatives to consider.
geodist vs gwasvcf: at a glance
What is geodist?
geodist stays dependency-free and fast, and warns you when 'cheap' distances stop being honest.
geodist computes geodesic distances between coordinate pairs in C with no dependencies, offering several measures that trade accuracy for speed — including a 'cheap' approximation used by default. The API is small and largely finished; 0.1.0 added geodist_min() for nearest-match lookups and 0.1.1 is a compiler warning fix.
What is gwasvcf?
gwasvcf has stopped adding features and now just keeps proxy matching from failing.
gwasvcf reads and queries GWAS summary statistics stored as VCF, with LD proxy lookup as its most-used entry point. Every release in the visible window is a fix, and all but one land in or around proxy_match(). The last functional addition was gwasvcf_to_summaryset() in 0.1.2, which hands data to gwasglue2 rather than doing new work here.
geodist vs gwasvcf: editorial side-by-side
geodist
0.0ANALYTICS
geodist stays dependency-free and fast, and warns you when 'cheap' distances stop being honest.
◆ Current state
geodist computes geodesic distances between coordinate pairs in C with no dependencies, offering several measures that trade accuracy for speed — including a 'cheap' approximation used by default. The API is small and largely finished; 0.1.0 added geodist_min() for nearest-match lookups and 0.1.1 is a compiler warning fix.
◆ Where it's heading
Development has been about making the speed-accuracy trade visible rather than hiding it. The 0.0.6 release added messages telling users to pick a different measure once the default cheap approximation is applied beyond 100km, where its error stops being negligible. Around that, the work is input handling — tibble support, better lon/lat column matching, vector inputs — and hardening the C code. It is a package that treats being small and correct as the feature.
◆ Prediction
Expect continued low-frequency maintenance: compiler warnings and geodesic source updates account for three of the last six releases, and the function surface has grown by only two entries in five years.
gwasvcf
0.0ANALYTICS
gwasvcf has stopped adding features and now just keeps proxy matching from failing.
◆ Current state
gwasvcf reads and queries GWAS summary statistics stored as VCF, with LD proxy lookup as its most-used entry point. Every release in the visible window is a fix, and all but one land in or around proxy_match(). The last functional addition was gwasvcf_to_summaryset() in 0.1.2, which hands data to gwasglue2 rather than doing new work here.
◆ Where it's heading
The package is in custodial maintenance inside the MRC IEU OpenGWAS stack, and its releases are reactive: each one answers a specific user-reported failure, credited to the reporter. The 0.1.6 pattern is telling — rather than replace the proxy VCF construction, it keeps the original path and adds a fallback only for inputs that fail, so existing results are left bit-for-bit unchanged.
◆ Prediction
Expect further narrow robustness fixes to proxy_match() driven by user-reported VCF shapes; nothing in the entries suggests new analysis capability is being built here rather than in gwasglue2.
Alternatives to geodist and gwasvcf
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either geodist or gwasvcf.
errors
errors keeps making uncertainty print the way each scientific field expects.
CMAQ
CMAQ went global in v5.5, and has been patching that surface ever since.
enpls
enpls has not changed its statistics since 2016 — only its website, twice.
grex
grex is a lookup table with a version number — it ships when the annotation moves.
protr
protr's feature set is finished; the work now is surviving Bioconductor's churn.
See all geodist alternatives → · See all gwasvcf alternatives →
Recent activity from geodist and gwasvcf
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 5mo agogwasvcfproxy_match() gains a fallback VCF construction path
- 8mo agogwasvcfproxy_match() handles multi-sample VCFs
- 1y agogeodistgeodist 0.1.1 clears a clang warning in geodesic.c
- 1y agogwasvcfsqlite3 declared in SystemRequirements
- 1y agogwasvcfMessage fix in get_ld_proxies()
- 2y agogeodistgeodist 0.1.0 adds geodist_min() for nearest matches
- 2y agogwasvcfgwasvcf_to_summaryset() bridges to gwasglue2
- 3y agogeodistgeodist 0.0.8 updates geodesic source, fixes clang warnings
- 5y agogeodistgeodist 0.0.7 improves lon/lat column matching and tibbles
- 5y agogeodistgeodist 0.0.6 warns when cheap distances exceed 100km
- 6y agogeodistgeodist 0.0.4 adds geodist_vec() for vector inputs
Frequently asked questions
What is the difference between geodist and gwasvcf?
They serve adjacent needs but don't currently overlap on shipped themes. geodist and gwasvcf are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is geodist better than gwasvcf?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. geodist and gwasvcf are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to geodist?
Top geodist alternatives in Analytics are ranked by recent ship velocity. Browse the "geodist alternatives" section above for the current picks, or visit /alternatives/geodist-r for the full list with editorial commentary on each.
What are the best alternatives to gwasvcf?
Top gwasvcf alternatives in Analytics are ranked by recent ship velocity. Browse the "gwasvcf alternatives" section above for the current picks, or visit /alternatives/gwasvcf for the full list with editorial commentary on each.