nflreadr
The nflverse data loader, whose releases are dictated by the NFL calendar and CRAN's archive policy
Comparison · Analytics
forrel vs mmconvert
A side-by-side editorial comparison of forrel and mmconvert — release velocity, themes, recent moves, and the top alternatives to consider.
forrel vs mmconvert: at a glance
What is forrel?
forrel is getting faster at the simulations forensic kinship work actually spends its time on.
forrel handles forensic pedigree analysis: kinship likelihood ratios, profile simulation, relationship checking, and missing person calculations. Version 1.9.0 synced with pedtools 2.11.0's loop handling, which the release notes credit with enabling complex pedigrees that were previously intractable, and moved profileSim() to mirai for parallelism. It also added fEstimate() for inbreeding coefficients and parentChildLikelihood() as a fast path for the simplest case.
What is mmconvert?
A single-purpose mouse map interpolator that solved its problem in 2023 and has coasted since
mmconvert does one thing: interpolate between GRCm39 physical positions and the revised Cox genetic map for mouse MUGA array markers. The substantive work all landed in a burst across 2021-2023 — the initial function, the GRCm39 annotation dataset, cross2_to_grcm39(), the recomputed Cox maps and their smoothed replacement. Everything since is upkeep: a warning-message fix in 0.12, and 0.14 is a test adjustment to silence a CRAN Note with no code change at all.
forrel vs mmconvert: editorial side-by-side
forrel
0.0ANALYTICS
forrel is getting faster at the simulations forensic kinship work actually spends its time on.
◆ Current state
forrel handles forensic pedigree analysis: kinship likelihood ratios, profile simulation, relationship checking, and missing person calculations. Version 1.9.0 synced with pedtools 2.11.0's loop handling, which the release notes credit with enabling complex pedigrees that were previously intractable, and moved profileSim() to mirai for parallelism. It also added fEstimate() for inbreeding coefficients and parentChildLikelihood() as a fast path for the simplest case.
◆ Where it's heading
Two long threads run through the window. One is making the common operations cheap: faster simulations through reorganized likelihood calculations, a dedicated parent-child path, dropped map attribute preservation, log-likelihoods to avoid underflow in kinshipLR(). The other is making relationship checking presentable, with checkPairwise() growing ggplot2 and plotly output, verbal relationship descriptions, and bootstrap p-values. Reference data is maintained alongside both, with the FORCE SNP panel completed and an X-chromosomal counterpart added.
◆ Prediction
With profileSim() on mirai and the loop handling synced, the next likely step is extending mirai parallelism to the other simulation-heavy functions such as exclusionPower() and the bootstrap in checkPairwise().
mmconvert
0.0ANALYTICS
A single-purpose mouse map interpolator that solved its problem in 2023 and has coasted since
◆ Current state
mmconvert does one thing: interpolate between GRCm39 physical positions and the revised Cox genetic map for mouse MUGA array markers. The substantive work all landed in a burst across 2021-2023 — the initial function, the GRCm39 annotation dataset, cross2_to_grcm39(), the recomputed Cox maps and their smoothed replacement. Everything since is upkeep: a warning-message fix in 0.12, and 0.14 is a test adjustment to silence a CRAN Note with no code change at all.
◆ Where it's heading
The package has reached the natural end state of a reference-data converter — the reference data stopped moving, so the package stopped moving. Releases now arrive roughly annually and exist to keep CRAN checks green. The 0.14 release shipped the same day as sibling qtl2convert 0.36, confirming these are batch maintenance passes across the maintainer's packages rather than independent development.
◆ Prediction
Without a new mouse genome build or a revised Cox map, the next release is likely another CRAN-check accommodation rather than new functionality.
Alternatives to forrel and mmconvert
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either forrel or mmconvert.
susier
Fine-mapping workhorse susieR spends its releases hunting null-effect trimming bugs
UCell
A rank-based gene signature scorer that has grown by adapting to whatever object format single-cell R uses next
detectseparation
A diagnostic package that generalized past its own name, then learned to say which kind of separation it found
brglm2
A bias-reduction package reaches 1.0 by adding an estimator built for high-dimensional logistic regression
bayestools
The JAGS toolkit under RoBMA, shipping the standardization machinery its downstream rewrite needed
See all forrel alternatives → · See all mmconvert alternatives →
Recent activity from forrel and mmconvert
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1mo agommconvertTest adjustment to clear a CRAN Note
- 1mo agoforrelmirai parallelism and faster profile simulation
- 1y agoforrelFORCE SNP panel completed and X-chromosomal set added
- 1y agommconvertFixes a malformed warning message in mmconvert()
- 1y agoforrelrankProfiles() and access to special lumping
- 1y agoforrelacrossComps argument and readFam() unexported
- 1y agoforrelcheckPairwise() overhauled with p-values and new plot backends
- 2y agoforrelFamilias interoperability split into pedFamilias
- 3y agommconvertOmits X chromosome positions for sex-averaged and male maps
- 3y agommconvertCRAN release adds chromosome lengths and smoothed Cox maps
- 3y agommconvertRecomputed Cox genetic maps and combined-array support
- 4y agommconvertRepoints data sources from master to main branches
Frequently asked questions
What is the difference between forrel and mmconvert?
They serve adjacent needs but don't currently overlap on shipped themes. forrel and mmconvert are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is forrel better than mmconvert?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. forrel and mmconvert are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to forrel?
Top forrel alternatives in Analytics are ranked by recent ship velocity. Browse the "forrel alternatives" section above for the current picks, or visit /alternatives/forrel for the full list with editorial commentary on each.
What are the best alternatives to mmconvert?
Top mmconvert alternatives in Analytics are ranked by recent ship velocity. Browse the "mmconvert alternatives" section above for the current picks, or visit /alternatives/mmconvert for the full list with editorial commentary on each.