rnaturalearth
rnaturalearth finished its sp exit and is now optimising how the data actually arrives.
Comparison · Analytics
cmdstanr vs rgbif
A side-by-side editorial comparison of cmdstanr and rgbif — release velocity, themes, recent moves, and the top alternatives to consider.
cmdstanr vs rgbif: at a glance
What is cmdstanr?
cmdstanr keeps adding fast approximations beside full HMC, and fighting Windows toolchains.
cmdstanr is the lightweight R interface to CmdStan, shelling out to the Stan binary rather than embedding it. The visible releases pair inference-method expansion, with laplace and pathfinder arriving in 0.7.0, against a continuous effort to make installation work on Windows. The most recent releases are dominated by CmdStan version compatibility and numerical fixes in the loo path.
What is rgbif?
rgbif is steadily pushing users off paged searching and onto real downloads.
rgbif ships several times a year and the recent releases cluster around downloads. 3.8.1 added `occ_download_sql()` for SQL-based occurrence downloads; 3.8.2 added DOI-to-download-key resolution and institutionKey downloads; 3.8.3 relayed GBIF's new throttling of bulk paging through `occ_search()` with a message pointing users at `occ_download()`; 3.8.5 added a family of `occ_download_stats_*()` functions plus multiple-taxonomy and verbatim-extension downloads. Alongside that, `name_backbone()` moved to GBIF API v2, and 3.8.0 soft-deprecated `occ_data()`.
cmdstanr vs rgbif: editorial side-by-side
cmdstanr
0.0ANALYTICS
cmdstanr keeps adding fast approximations beside full HMC, and fighting Windows toolchains.
◆ Current state
cmdstanr is the lightweight R interface to CmdStan, shelling out to the Stan binary rather than embedding it. The visible releases pair inference-method expansion, with laplace and pathfinder arriving in 0.7.0, against a continuous effort to make installation work on Windows. The most recent releases are dominated by CmdStan version compatibility and numerical fixes in the loo path.
◆ Where it's heading
The package tracks CmdStan closely, and its own work concentrates in two places. One is broadening the method surface so approximate inference sits beside sampling on the same object, extended in 0.8.0 by letting a completed fit supply initial values for the next run. The other is cutting installation friction, which reaches its conclusion in 0.9.0 with RTools45 supported and no additional toolchain setup needed on Windows. Dependency trimming, such as dropping RcppEigen for direct Eigen interop, runs alongside both.
◆ Prediction
The cadence is a CmdStan release followed by a compatibility release here, so expect the next to track a newer CmdStan and continue the effective-sample-size numerical work in the loo method.
rgbif
0.0ANALYTICS
rgbif is steadily pushing users off paged searching and onto real downloads.
◆ Current state
rgbif ships several times a year and the recent releases cluster around downloads. 3.8.1 added `occ_download_sql()` for SQL-based occurrence downloads; 3.8.2 added DOI-to-download-key resolution and institutionKey downloads; 3.8.3 relayed GBIF's new throttling of bulk paging through `occ_search()` with a message pointing users at `occ_download()`; 3.8.5 added a family of `occ_download_stats_*()` functions plus multiple-taxonomy and verbatim-extension downloads. Alongside that, `name_backbone()` moved to GBIF API v2, and 3.8.0 soft-deprecated `occ_data()`.
◆ Where it's heading
Two things are happening at once. GBIF is discouraging bulk retrieval through the search API, and rgbif is building out the download path fast enough to absorb the traffic — SQL queries, DOI round-tripping, format description, and now statistics about the downloads themselves. Metadata coverage has expanded in parallel, with a dozen `dataset_*()` functions in 3.7.9 and GRSciColl institution search in 3.8.3. The deprecations are consistent: `occ_data()`, `occ_facet()`, `occ_count(type=)` all retired in favour of narrower replacements.
◆ Prediction
The download surface is where the next additions will land — likely more SQL-download tooling and further statistics endpoints, following 3.8.1 and 3.8.5.
Alternatives to cmdstanr and rgbif
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either cmdstanr or rgbif.
writexl
writexl spent nine years refusing to do formatting, then shipped all of it in 2.0.0.
rstanarm
rstanarm is community-maintained now, tracking Stan and lme4 rather than adding models.
taxa
taxa started a ground-up rewrite in 2021 and has published almost nothing since.
rotl
rotl's whole release history is keeping name matching honest against a moving taxonomy.
taxize
taxize spends its releases absorbing other people's API changes, one dead source at a time.
See all cmdstanr alternatives → · See all rgbif alternatives →
Recent activity from cmdstanr and rgbif
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 4mo agorgbifrgbif 3.8.5 adds occurrence download statistics functions
- 4mo agocmdstanrRTools45 support; Windows needs no extra toolchain setup
- 4mo agocmdstanrBugfix release: SUNDIALS linking, Windows paths, RTools
- 4mo agocmdstanrCmdStanFit objects usable as initial values; RcppEigen dropped
- 8mo agorgbifrgbif 3.8.4 moves name matching to GBIF API v2
- 11mo agorgbifrgbif 3.8.3 adds GRSciColl search, relays GBIF paging throttle
- 1y agorgbifrgbif 3.8.2 resolves download DOIs to keys
- 1y agorgbifrgbif 3.8.1 adds SQL-based occurrence downloads ⚡
- 2y agorgbifrgbif 3.8.0 soft-deprecates occ_data(), adds download describe
- 2y agocmdstanrBugfix release with dedicated hpp generation step
- 2y agocmdstanrLaplace and Pathfinder inference methods added ⚡
- 2y agocmdstanrjacobian argument enabled for optimization; assorted fixes
Frequently asked questions
What is the difference between cmdstanr and rgbif?
They serve adjacent needs but don't currently overlap on shipped themes. cmdstanr and rgbif are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is cmdstanr better than rgbif?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. cmdstanr and rgbif are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to cmdstanr?
Top cmdstanr alternatives in Analytics are ranked by recent ship velocity. Browse the "cmdstanr alternatives" section above for the current picks, or visit /alternatives/cmdstanr for the full list with editorial commentary on each.
What are the best alternatives to rgbif?
Top rgbif alternatives in Analytics are ranked by recent ship velocity. Browse the "rgbif alternatives" section above for the current picks, or visit /alternatives/rgbif for the full list with editorial commentary on each.