rnaturalearth
rnaturalearth finished its sp exit and is now optimising how the data actually arrives.
Comparison · Analytics
cmdstanr vs rotl
A side-by-side editorial comparison of cmdstanr and rotl — release velocity, themes, recent moves, and the top alternatives to consider.
cmdstanr vs rotl: at a glance
What is cmdstanr?
cmdstanr keeps adding fast approximations beside full HMC, and fighting Windows toolchains.
cmdstanr is the lightweight R interface to CmdStan, shelling out to the Stan binary rather than embedding it. The visible releases pair inference-method expansion, with laplace and pathfinder arriving in 0.7.0, against a continuous effort to make installation work on Windows. The most recent releases are dominated by CmdStan version compatibility and numerical fixes in the loo path.
What is rotl?
rotl's whole release history is keeping name matching honest against a moving taxonomy.
Nearly every entry concerns `tnrs_match_names()`, the function that maps user-supplied names onto Open Tree taxonomy ids. 3.1.0 changed which taxon wins a multi-way match — highest matching score rather than lowest OTT id, reversing the rule 3.0.4 introduced. 3.0.12 defaulted `context_name` to 'All life' so a context inferred from the first name could not silently skew later ones. 3.0.11 made a total failure to match return an empty tibble with a warning instead of an error. The rest are small fixes tracking Open Tree API changes.
cmdstanr vs rotl: editorial side-by-side
cmdstanr
0.0ANALYTICS
cmdstanr keeps adding fast approximations beside full HMC, and fighting Windows toolchains.
◆ Current state
cmdstanr is the lightweight R interface to CmdStan, shelling out to the Stan binary rather than embedding it. The visible releases pair inference-method expansion, with laplace and pathfinder arriving in 0.7.0, against a continuous effort to make installation work on Windows. The most recent releases are dominated by CmdStan version compatibility and numerical fixes in the loo path.
◆ Where it's heading
The package tracks CmdStan closely, and its own work concentrates in two places. One is broadening the method surface so approximate inference sits beside sampling on the same object, extended in 0.8.0 by letting a completed fit supply initial values for the next run. The other is cutting installation friction, which reaches its conclusion in 0.9.0 with RTools45 supported and no additional toolchain setup needed on Windows. Dependency trimming, such as dropping RcppEigen for direct Eigen interop, runs alongside both.
◆ Prediction
The cadence is a CmdStan release followed by a compatibility release here, so expect the next to track a newer CmdStan and continue the effective-sample-size numerical work in the loo method.
rotl
0.0ANALYTICS
rotl's whole release history is keeping name matching honest against a moving taxonomy.
◆ Current state
Nearly every entry concerns `tnrs_match_names()`, the function that maps user-supplied names onto Open Tree taxonomy ids. 3.1.0 changed which taxon wins a multi-way match — highest matching score rather than lowest OTT id, reversing the rule 3.0.4 introduced. 3.0.12 defaulted `context_name` to 'All life' so a context inferred from the first name could not silently skew later ones. 3.0.11 made a total failure to match return an empty tibble with a warning instead of an error. The rest are small fixes tracking Open Tree API changes.
◆ Where it's heading
The recurring problem is ambiguity: names match several taxa, and the package has changed its tie-breaking rule twice while making failures and edge cases return predictable objects rather than errors. Nothing here expands what rotl can retrieve; it makes what it retrieves reproducible. The feed also stops in mid-2023, so the package appears dormant.
◆ Prediction
Nothing in the window suggests new capability. If a release comes, the pattern says it will follow an Open Tree API change or another matching-behaviour correction.
Alternatives to cmdstanr and rotl
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either cmdstanr or rotl.
writexl
writexl spent nine years refusing to do formatting, then shipped all of it in 2.0.0.
rgbif
rgbif is steadily pushing users off paged searching and onto real downloads.
rstanarm
rstanarm is community-maintained now, tracking Stan and lme4 rather than adding models.
taxa
taxa started a ground-up rewrite in 2021 and has published almost nothing since.
taxize
taxize spends its releases absorbing other people's API changes, one dead source at a time.
See all cmdstanr alternatives → · See all rotl alternatives →
Recent activity from cmdstanr and rotl
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 4mo agocmdstanrRTools45 support; Windows needs no extra toolchain setup
- 4mo agocmdstanrBugfix release: SUNDIALS linking, Windows paths, RTools
- 4mo agocmdstanrCmdStanFit objects usable as initial values; RcppEigen dropped
- 2y agocmdstanrBugfix release with dedicated hpp generation step
- 2y agocmdstanrLaplace and Pathfinder inference methods added ⚡
- 2y agocmdstanrjacobian argument enabled for optimization; assorted fixes
- 3y agorotlrotl 3.1.0 matches on score instead of lowest OTT id
- 4y agorotlrotl 3.0.12 defaults matching context to All life
- 5y agorotlrotl 3.0.11 returns empty tibble when no names match
- 6y agorotlrotl 3.0.10 tracks Open Tree API updates
- 7y agorotlrotl 3.0.9 tracks Open Tree API updates
- 7y agorotlrotl 3.0.7 updates vignette for TNRS endpoint change
Frequently asked questions
What is the difference between cmdstanr and rotl?
They serve adjacent needs but don't currently overlap on shipped themes. cmdstanr and rotl are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is cmdstanr better than rotl?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. cmdstanr and rotl are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to cmdstanr?
Top cmdstanr alternatives in Analytics are ranked by recent ship velocity. Browse the "cmdstanr alternatives" section above for the current picks, or visit /alternatives/cmdstanr for the full list with editorial commentary on each.
What are the best alternatives to rotl?
Top rotl alternatives in Analytics are ranked by recent ship velocity. Browse the "rotl alternatives" section above for the current picks, or visit /alternatives/rotl for the full list with editorial commentary on each.