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Comparison · Analytics
abclass vs mmconvert
A side-by-side editorial comparison of abclass and mmconvert — release velocity, themes, recent moves, and the top alternatives to consider.
abclass vs mmconvert: at a glance
What is abclass?
abclass built out angle-based classifiers in 2022, then went quiet except for CRAN upkeep.
An implementation of multi-category angle-based large-margin classifiers with regularization. The capability was assembled in four releases across 2022: group lasso, then group SCAD and MCP penalties, then sparse matrix input, cross-validation via cv.abclass(), an efficient tuning path in et.abclass(), and experimental sup-norm classifiers. After a three-year gap, 0.5.0 simplified how group penalties are specified and 0.5.1 swapped the quadratic programming backend after qpmadr was archived on CRAN.
What is mmconvert?
A single-purpose mouse map interpolator that solved its problem in 2023 and has coasted since
mmconvert does one thing: interpolate between GRCm39 physical positions and the revised Cox genetic map for mouse MUGA array markers. The substantive work all landed in a burst across 2021-2023 — the initial function, the GRCm39 annotation dataset, cross2_to_grcm39(), the recomputed Cox maps and their smoothed replacement. Everything since is upkeep: a warning-message fix in 0.12, and 0.14 is a test adjustment to silence a CRAN Note with no code change at all.
abclass vs mmconvert: editorial side-by-side
abclass
0.0ANALYTICS
abclass built out angle-based classifiers in 2022, then went quiet except for CRAN upkeep.
◆ Current state
An implementation of multi-category angle-based large-margin classifiers with regularization. The capability was assembled in four releases across 2022: group lasso, then group SCAD and MCP penalties, then sparse matrix input, cross-validation via cv.abclass(), an efficient tuning path in et.abclass(), and experimental sup-norm classifiers. After a three-year gap, 0.5.0 simplified how group penalties are specified and 0.5.1 swapped the quadratic programming backend after qpmadr was archived on CRAN.
◆ Where it's heading
The methods surface is complete and the package has moved into maintenance, where releases are triggered by the R ecosystem rather than by research. The one structural habit worth noting is a willingness to change defaults — alpha, epsilon, lum_c and now the cross-validation alignment have all shifted between versions, so results are not stable across upgrades unless arguments are set explicitly.
◆ Prediction
Expect further releases to track CRAN dependency changes, as 0.5.1 did within a day of qpmadr's archival; nothing in the entries points to new penalty families.
mmconvert
0.0ANALYTICS
A single-purpose mouse map interpolator that solved its problem in 2023 and has coasted since
◆ Current state
mmconvert does one thing: interpolate between GRCm39 physical positions and the revised Cox genetic map for mouse MUGA array markers. The substantive work all landed in a burst across 2021-2023 — the initial function, the GRCm39 annotation dataset, cross2_to_grcm39(), the recomputed Cox maps and their smoothed replacement. Everything since is upkeep: a warning-message fix in 0.12, and 0.14 is a test adjustment to silence a CRAN Note with no code change at all.
◆ Where it's heading
The package has reached the natural end state of a reference-data converter — the reference data stopped moving, so the package stopped moving. Releases now arrive roughly annually and exist to keep CRAN checks green. The 0.14 release shipped the same day as sibling qtl2convert 0.36, confirming these are batch maintenance passes across the maintainer's packages rather than independent development.
◆ Prediction
Without a new mouse genome build or a revised Cox map, the next release is likely another CRAN-check accommodation rather than new functionality.
Alternatives to abclass and mmconvert
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either abclass or mmconvert.
cfbfastr
College football's open data client hit v2 — and now reports how many API calls you have left.
rnpn
The USA phenology data client rebuilt its entire stack and stopped handing users -9999 as a number.
GeneNMF
GeneNMF rebuilt how it derives meta-programs, changing every result it had produced.
rempsyc
Publication-ready psychology tables and plots, tracking APA style as closely as the software allows.
sdsfun
A spatial-statistics utility package exists to be depended on, and is built accordingly.
See all abclass alternatives → · See all mmconvert alternatives →
Recent activity from abclass and mmconvert
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1mo agommconvertTest adjustment to clear a CRAN Note
- 7mo agoabclassQuadratic programming backend swapped after CRAN archival
- 10mo agoabclassGroup penalty specification simplified
- 1y agommconvertFixes a malformed warning message in mmconvert()
- 3y agommconvertOmits X chromosome positions for sex-averaged and male maps
- 3y agommconvertCRAN release adds chromosome lengths and smoothed Cox maps
- 3y agommconvertRecomputed Cox genetic maps and combined-array support
- 3y agoabclassSparse input, cross-validation and efficient tuning added
- 4y agoabclassGroup SCAD and MCP penalties added
- 4y agoabclassGroup lasso regularization and correctness fixes
- 4y agoabclassFirst release of the angle-based classifiers
- 4y agommconvertRepoints data sources from master to main branches
Frequently asked questions
What is the difference between abclass and mmconvert?
They serve adjacent needs but don't currently overlap on shipped themes. abclass and mmconvert are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is abclass better than mmconvert?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. abclass and mmconvert are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to abclass?
Top abclass alternatives in Analytics are ranked by recent ship velocity. Browse the "abclass alternatives" section above for the current picks, or visit /alternatives/abclass for the full list with editorial commentary on each.
What are the best alternatives to mmconvert?
Top mmconvert alternatives in Analytics are ranked by recent ship velocity. Browse the "mmconvert alternatives" section above for the current picks, or visit /alternatives/mmconvert for the full list with editorial commentary on each.