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pharmaversesdtm

ANALYTICS
Velocity0.0

Test SDTM data for use within the pharmaverse family of packages

pharmaverse.github.io/pharmaversesdtm ↗

pharmaversesdtm is the test-data layer every pharmaverse package now builds against.

pharmaversesdtmcdisctest-dataclinical-trials
◆Current state
The package ships example SDTM datasets and has grown one therapeutic area at a time — ophthalmology, oncology response criteria, vaccines, metabolic, neurology, and now lymphoma under Lugano 2014. Sibling packages keep moving their internal test data here, so its release notes double as a record of what the rest of the pharmaverse is building.
◆Where it's heading
Two kinds of work alternate: adding domains and biomarkers for a new indication, and making the existing data easier to reach — CSV copies under inst/extdata for non-R programmers, a datasets preview vignette, reference pages categorised by therapeutic area, variable-by-variable breakdowns. Consistency fixes against CDISC terminology and SDTM guidelines run through every release.
◆Prediction
New therapeutic areas will keep arriving in step with the admiral extension packages that need them; the neurology and metabolic datasets landed just ahead of admiralneuro and admiralmetabolic needing them, and lymphoma looks like the next in that sequence.

◆Recent moves

  1. 1mo ago

    Lymphoma response data and geographic-atrophy tests

    Adds an rs_onco_lymphoma response dataset using Lugano 2014 criteria, geographic-atrophy tests in oe_ophtha, and pTau-181 to lb_neuro. Each addition is a therapeutic area some downstream admiral package is about to need.

    View source ↗
  2. 4mo ago

    CSV exports and microbiology domains for wider access

    Ships CSV copies of every SDTM dataset under inst/extdata for non-R programmers, adds microbiology, susceptibility and biospecimen-events domains, and a datasets preview vignette. The access work matters as much as the data — it opens the package to SAS-side reviewers.

    View source ↗
  3. 7mo ago

    Neurological SDTM datasets and Alzheimer's biomarkers

    Adds the neurological SDTM family — dm_neuro, nv_neuro, suppnv_neuro, ag_neuro, lb_neuro — plus Lumipulse pTau217 and amyloid measures, and corrects PCWG3 response misclassification. This is the data admiralneuro was built on.

    View source ↗
  4. 11mo ago

    Maintainer and licensing update

    A maintainer handover and licensing updates, with no change to the datasets.

    View source ↗
  5. 1y ago

    Metabolic SDTM datasets and PCWG3 oncology response

    Adds the metabolic SDTM family and PCWG3 oncology response data, aligns eg units with SDTM guidelines, and strips non-standard variables from ex_vaccine. The metabolic datasets are what admiralmetabolic's templates were then written against.

    View source ↗
  6. 1y ago

    GCIG response data and automated reference pages

    Adds GCIG ovarian response data as rs_onco_ca125 and supprs_onco_ca125, and automates how reference pages are built with a variable-by-variable breakdown of each dataset.

    View source ↗