mrbayes
mrbayes spent 2026 auditing its own Bayesian MR estimators for coding errors.
Comparison · Analytics
spatstat.random vs vegan
A side-by-side editorial comparison of spatstat.random and vegan — release velocity, themes, recent moves, and the top alternatives to consider.
spatstat.random vs vegan: at a glance
What is spatstat.random?
spatstat's simulation engine pushes point process generation into three dimensions
spatstat.random generates random point patterns and simulates point process models for the spatstat family. Its recent releases have moved along two lines at once: filling out three-dimensional simulation, and adding conditional simulation to the established cluster process generators. 3.5-1 is a narrow follow-up adding a random Dirichlet-Voronoi tessellation without edge effects.
What is vegan?
Community ecology's standard toolkit is retiring the functions a generation of scripts was built on.
vegan is the reference R package for ordination and diversity analysis in community ecology. The 2.7 line redesigned constrained ordination graphics from scratch, made adonis defunct in favor of adonis2, and moved permutation tests for partial RDA and db-RDA onto residualized predictors. The current 2.7-5 release is stabilization — parallel processing on Windows, ggvegan compatibility for tidy scores, and arrow label placement.
spatstat.random vs vegan: editorial side-by-side
spatstat.random
2.5ANALYTICS
spatstat's simulation engine pushes point process generation into three dimensions
◆ Current state
spatstat.random generates random point patterns and simulates point process models for the spatstat family. Its recent releases have moved along two lines at once: filling out three-dimensional simulation, and adding conditional simulation to the established cluster process generators. 3.5-1 is a narrow follow-up adding a random Dirichlet-Voronoi tessellation without edge effects.
◆ Where it's heading
The clearest arc is dimensional. 3.5-0 carried inhomogeneous Poisson processes, non-uniform random points and Simple Sequential Inhibition into 3D in a single release, and the sibling geometry package followed two months later with more capabilities for three-dimensional point patterns. Alongside that, the generators have been gaining theoretical range — Gaussian random fields in 3.4-4, a new class of theoretical cluster process models and random diffusion in 3.5-0 — while earlier releases concentrated on conditional simulation and efficiency in the existing 2D routines.
◆ Prediction
Expect the 3D work to continue propagating into the model-fitting and geometry packages before spatstat.random adds another dimension-independent generator, since the 3D features here have already begun appearing downstream. The entries do not indicate which estimator gets 3D support next.
vegan
0.0ANALYTICS
Community ecology's standard toolkit is retiring the functions a generation of scripts was built on.
◆ Current state
vegan is the reference R package for ordination and diversity analysis in community ecology. The 2.7 line redesigned constrained ordination graphics from scratch, made adonis defunct in favor of adonis2, and moved permutation tests for partial RDA and db-RDA onto residualized predictors. The current 2.7-5 release is stabilization — parallel processing on Windows, ggvegan compatibility for tidy scores, and arrow label placement.
◆ Where it's heading
Two long deprecation programs are converging. Plotting is being pushed out of the package: lattice functions are deprecated in favor of ggplot2 equivalents now living in ggvegan, a separate CRAN package, while vegan's own base graphics were rebuilt around independently configurable score types and pipe-based construction. Meanwhile the statistical core is being made internally consistent — add1 and drop1 no longer use different internal models, and summary is no longer an accepted route to ordination scores.
◆ Prediction
Expect the remaining lattice functions to go defunct and more plotting responsibility to shift to ggvegan, leaving vegan as the statistical engine with a thin base graphics layer.
Alternatives to spatstat.random and vegan
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either spatstat.random or vegan.
lineup2
lineup2 ships once every few years, and 2026's release is a logo and a core-count tweak.
stringi
stringi has spent two years on build hardening since its Unicode 15.1 reset.
OHPL
A 2017 chemometrics method frozen in place, visited only when CRAN changes its documentation rules.
fastplyr
A fast dplyr stand-in that keeps finding new places to skip work entirely.
trias
Belgium's invasive-species indicator toolkit is in steady refinement, one plotting edge case at a time.
See all spatstat.random alternatives → · See all vegan alternatives →
Recent activity from spatstat.random and vegan
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 20d agospatstat.randomEdge-effect-free random Dirichlet-Voronoi tessellation
- 2mo agospatstat.randomThree-dimensional point process simulation arrives ⚡
- 2mo agoveganParallel processing stabilized, especially on Windows
- 5mo agoveganLattice plotting deprecated as ggvegan reaches CRAN
- 6mo agospatstat.randomGaussian random field generation added
- 10mo agoveganPartial RDA permutation tests adopt residualized predictors
- 10mo agospatstat.randomrunifdisc efficiency and fixed-count simulation options
- 1y agoveganOrdination graphics rebuilt and adonis made defunct ⚡
- 1y agospatstat.randomConditional simulation for the cluster process generators
- 1y agospatstat.randomFaster rpoispp for tessellation-defined intensity
- 1y agoveganRelease chasing undefined behavior in a C function
- 1y agoveganpca, ca and pco added for unconstrained ordination
Frequently asked questions
What is the difference between spatstat.random and vegan?
They serve adjacent needs but don't currently overlap on shipped themes. spatstat.random is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is spatstat.random better than vegan?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. spatstat.random is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to spatstat.random?
Top spatstat.random alternatives in Analytics are ranked by recent ship velocity. Browse the "spatstat.random alternatives" section above for the current picks, or visit /alternatives/spatstat-random for the full list with editorial commentary on each.
What are the best alternatives to vegan?
Top vegan alternatives in Analytics are ranked by recent ship velocity. Browse the "vegan alternatives" section above for the current picks, or visit /alternatives/vegan-r for the full list with editorial commentary on each.