paleobuddy
paleobuddy can now simulate trait-dependent diversification, not just birth-death.
Comparison · Analytics
SimInf vs spatstat.random
A side-by-side editorial comparison of SimInf and spatstat.random — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r-package
SimInf vs spatstat.random: at a glance
What is SimInf?
SimInf 10.0 turns an epidemic simulator into a tool that fits models to real time series
SimInf simulates stochastic disease spread over networks of nodes, with a model parser that compiles user-specified transitions to C. Version 10.0.0 was a deliberate major break: the SimInf_pfilter S4 class and the bootstrap filtering interface were redesigned, a replicates slot was added to SimInf_model, a multi-particle variant of the split-step solver arrived, and the package gained Particle Markov Chain Monte Carlo fitting against observed time series. The follow-up 10.1.0 is a single zero-length memcpy fix found by CRAN's M1 checks.
What is spatstat.random?
spatstat's simulation engine pushes point process generation into three dimensions
spatstat.random generates random point patterns and simulates point process models for the spatstat family. Its recent releases have moved along two lines at once: filling out three-dimensional simulation, and adding conditional simulation to the established cluster process generators. 3.5-1 is a narrow follow-up adding a random Dirichlet-Voronoi tessellation without edge effects.
SimInf vs spatstat.random: editorial side-by-side
SimInf
0.0ANALYTICS
SimInf 10.0 turns an epidemic simulator into a tool that fits models to real time series
◆ Current state
SimInf simulates stochastic disease spread over networks of nodes, with a model parser that compiles user-specified transitions to C. Version 10.0.0 was a deliberate major break: the SimInf_pfilter S4 class and the bootstrap filtering interface were redesigned, a replicates slot was added to SimInf_model, a multi-particle variant of the split-step solver arrived, and the package gained Particle Markov Chain Monte Carlo fitting against observed time series. The follow-up 10.1.0 is a single zero-length memcpy fix found by CRAN's M1 checks.
◆ Where it's heading
The package has been moving from simulation toward inference for several releases. The 9.x line built the input side — utilities for cleaning raw individual event data, variables and enumeration constants in the model parser — and 10.0.0 closed the loop by making the simulator fittable to data through PMCMC. The version number was incremented precisely because that required breaking the particle filter interface.
◆ Prediction
Fitting machinery this new usually needs a second pass on usability, so the next releases most likely focus on diagnostics and documentation around PMCMC rather than on the simulation core, which has been stable across the whole 9.x and 10.x history.
spatstat.random
2.5ANALYTICS
spatstat's simulation engine pushes point process generation into three dimensions
◆ Current state
spatstat.random generates random point patterns and simulates point process models for the spatstat family. Its recent releases have moved along two lines at once: filling out three-dimensional simulation, and adding conditional simulation to the established cluster process generators. 3.5-1 is a narrow follow-up adding a random Dirichlet-Voronoi tessellation without edge effects.
◆ Where it's heading
The clearest arc is dimensional. 3.5-0 carried inhomogeneous Poisson processes, non-uniform random points and Simple Sequential Inhibition into 3D in a single release, and the sibling geometry package followed two months later with more capabilities for three-dimensional point patterns. Alongside that, the generators have been gaining theoretical range — Gaussian random fields in 3.4-4, a new class of theoretical cluster process models and random diffusion in 3.5-0 — while earlier releases concentrated on conditional simulation and efficiency in the existing 2D routines.
◆ Prediction
Expect the 3D work to continue propagating into the model-fitting and geometry packages before spatstat.random adds another dimension-independent generator, since the 3D features here have already begun appearing downstream. The entries do not indicate which estimator gets 3D support next.
Alternatives to SimInf and spatstat.random
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either SimInf or spatstat.random.
geodist
geodist stays dependency-free and fast, and warns you when 'cheap' distances stop being honest.
errors
errors keeps making uncertainty print the way each scientific field expects.
CMAQ
CMAQ went global in v5.5, and has been patching that surface ever since.
enpls
enpls has not changed its statistics since 2016 — only its website, twice.
grex
grex is a lookup table with a version number — it ships when the annotation moves.
See all SimInf alternatives → · See all spatstat.random alternatives →
Recent activity from SimInf and spatstat.random
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 20d agospatstat.randomEdge-effect-free random Dirichlet-Voronoi tessellation
- 2mo agospatstat.randomThree-dimensional point process simulation arrives ⚡
- 6mo agospatstat.randomGaussian random field generation added
- 9mo agoSimInfAvoid memcpy on zero-length continuous state vector
- 9mo agoSimInfPMCMC fitting arrives; particle filter interface redesigned ⚡
- 10mo agospatstat.randomrunifdisc efficiency and fixed-count simulation options
- 1y agospatstat.randomConditional simulation for the cluster process generators
- 1y agospatstat.randomFaster rpoispp for tessellation-defined intensity
- 2y agoSimInfDocumentation link anchors; parser dependency fix
- 2y agoSimInfModel parser gains variables and enumeration constants
- 2y agoSimInfindividual_events() added for raw event data cleaning
- 3y agoSimInfConfigure script uses R to locate the compiler
Frequently asked questions
What is the difference between SimInf and spatstat.random?
Both compete on the same themes — r-package — within Analytics. spatstat.random is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is SimInf better than spatstat.random?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. spatstat.random is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to SimInf?
Top SimInf alternatives in Analytics are ranked by recent ship velocity. Browse the "SimInf alternatives" section above for the current picks, or visit /alternatives/siminf-r for the full list with editorial commentary on each.
What are the best alternatives to spatstat.random?
Top spatstat.random alternatives in Analytics are ranked by recent ship velocity. Browse the "spatstat.random alternatives" section above for the current picks, or visit /alternatives/spatstat-random for the full list with editorial commentary on each.