nflreadr
The nflverse data loader, whose releases are dictated by the NFL calendar and CRAN's archive policy
Comparison · Analytics
qtl2fst vs trendseries
A side-by-side editorial comparison of qtl2fst and trendseries — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r-package
qtl2fst vs trendseries: at a glance
What is qtl2fst?
The out-of-memory backend for R/qtl2, feature-complete since 2020 and now purely on upkeep
qtl2fst backs R/qtl2 genotype probabilities with on-disk fst files so large crosses don't have to fit in RAM. Its defining release was 0.22 in 2020, which added calc_genoprob_fst() and genoprob_to_alleleprob_fst() to fuse calculation and storage in one step. The five releases since are documentation links, directory-creation robustness, a Windows example fix, and — in 0.32 — a change to how cores=0 is interpreted.
What is trendseries?
A trend-extraction toolkit grows a full decomposition engine, seasonal components and all.
trendseries extracts trends from economic time series through two pipe-friendly functions, backed by an unusually broad method set — Hodrick-Prescott in one- and two-sided variants, Baxter-King, Christiano-Fitzgerald, Hamilton regression, Beveridge-Nelson, unobserved components, plus the moving average and smoothing family. The 1.4 release adds decomposition proper: an exported decompose_series() that splits a series into trend, seasonal, and remainder across five methods and guarantees the components add back to the original values.
qtl2fst vs trendseries: editorial side-by-side
qtl2fst
0.0ANALYTICS
The out-of-memory backend for R/qtl2, feature-complete since 2020 and now purely on upkeep
◆ Current state
qtl2fst backs R/qtl2 genotype probabilities with on-disk fst files so large crosses don't have to fit in RAM. Its defining release was 0.22 in 2020, which added calc_genoprob_fst() and genoprob_to_alleleprob_fst() to fuse calculation and storage in one step. The five releases since are documentation links, directory-creation robustness, a Windows example fix, and — in 0.32 — a change to how cores=0 is interpreted.
◆ Where it's heading
The package has settled into the role of a stable satellite of R/qtl2: it tracks the parent package's conventions rather than setting its own. The cores=0 change in 0.32 arrived alongside the identical change in qtl2convert, so the parallel-computing default is being standardized across the maintainer's packages at once. Release intervals have stretched from months to years.
◆ Prediction
Further releases will most likely mirror changes originating in R/qtl2 or CRAN checks, in the same follow-the-parent pattern as 0.24 and 0.32.
trendseries
3.8ANALYTICS
A trend-extraction toolkit grows a full decomposition engine, seasonal components and all.
◆ Current state
trendseries extracts trends from economic time series through two pipe-friendly functions, backed by an unusually broad method set — Hodrick-Prescott in one- and two-sided variants, Baxter-King, Christiano-Fitzgerald, Hamilton regression, Beveridge-Nelson, unobserved components, plus the moving average and smoothing family. The 1.4 release adds decomposition proper: an exported decompose_series() that splits a series into trend, seasonal, and remainder across five methods and guarantees the components add back to the original values.
◆ Where it's heading
The package is moving from breadth of methods to rigour about what those methods produce. Recent work has been about defaults and guarantees rather than new filters: the unobserved components model now derives its signal-to-noise ratios from Hodrick-Prescott lambdas so the default output is economically interpretable, decomposition carries an exact additive identity, and a log transform gives a uniform multiplicative variant across every method. Naming is being tidied in the same spirit, with group_vars deprecated in favour of group_cols. Side-by-side method comparison — passing several methods and getting each one's components as separate columns — suggests an audience that treats method choice as a research question rather than a setting.
◆ Prediction
Expect the comparison and diagnostic side to keep developing, since the package now produces multiple decompositions of the same series and offers no ranking between them; the entries give no indication of new filters being queued.
Alternatives to qtl2fst and trendseries
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either qtl2fst or trendseries.
susier
Fine-mapping workhorse susieR spends its releases hunting null-effect trimming bugs
UCell
A rank-based gene signature scorer that has grown by adapting to whatever object format single-cell R uses next
detectseparation
A diagnostic package that generalized past its own name, then learned to say which kind of separation it found
brglm2
A bias-reduction package reaches 1.0 by adding an estimator built for high-dimensional logistic regression
bayestools
The JAGS toolkit under RoBMA, shipping the standardization machinery its downstream rewrite needed
See all qtl2fst alternatives → · See all trendseries alternatives →
Recent activity from qtl2fst and trendseries
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 15d agotrendseriesDecomposition becomes a first-class operation, five methods deep ⚡
- 1mo agoqtl2fstcores=0 now leaves one core free instead of taking all
- 3mo agotrendseriesMulti-column trends and economically grounded UCM defaults
- 10mo agotrendseriesFirst production release with 21 trend extraction methods
- 1y agoqtl2fstWindows fix for the replace_path() example
- 2y agoqtl2fstDocumentation link fix
- 4y agoqtl2fstCreates missing directories instead of erroring out
- 5y agoqtl2fstTest coverage for qtl2 functions against fst-backed probabilities
- 6y agoqtl2fstDocumentation and metadata cleanup for CRAN
Frequently asked questions
What is the difference between qtl2fst and trendseries?
Both compete on the same themes — r-package — within Analytics. trendseries is currently shipping more aggressively (velocity 3.8 vs 0.0), with 1 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is qtl2fst better than trendseries?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. trendseries is currently shipping more aggressively (velocity 3.8 vs 0.0), with 1 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to qtl2fst?
Top qtl2fst alternatives in Analytics are ranked by recent ship velocity. Browse the "qtl2fst alternatives" section above for the current picks, or visit /alternatives/qtl2fst for the full list with editorial commentary on each.
What are the best alternatives to trendseries?
Top trendseries alternatives in Analytics are ranked by recent ship velocity. Browse the "trendseries alternatives" section above for the current picks, or visit /alternatives/trendseries for the full list with editorial commentary on each.