nflreadr
The nflverse data loader, whose releases are dictated by the NFL calendar and CRAN's archive policy
Comparison · Analytics
qtl2convert vs scimesh
A side-by-side editorial comparison of qtl2convert and scimesh — release velocity, themes, recent moves, and the top alternatives to consider.
qtl2convert vs scimesh: at a glance
What is qtl2convert?
A conversion utility in pure maintenance mode, tracking R-devel breakage release by release
qtl2convert is the format-shim of the R/qtl2 ecosystem: it moves genotype probabilities and genetic maps between DOQTL, R/qtl and R/qtl2 representations. The last three releases contain no new conversion functions at all — 0.32 fixed a C string comparison flagged by CRAN, 0.34 restored attribute-clearing that R-devel 4.7 changed underneath the package, and 0.36 adjusted parallel core defaults plus a test tweak. The functional surface has been stable since 0.26 added cross2_ril_to_genril().
What is scimesh?
A C++ mesh renderer grinding through CRAN's gate, one policy fix at a time
scimesh is a C++ scientific mesh rendering library with an R binding, released in tight bursts by the dfsp-spirit neuroimaging group. The last month is dominated by CRAN admission work: stripped debug symbols, assert removal in vendored third-party code, vignette index fixes. Around that compliance grind sit genuine additions — an rgl-to-scimesh auto-conversion path, a camera_orbit helper for video, contrast as a render option.
qtl2convert vs scimesh: editorial side-by-side
qtl2convert
0.0ANALYTICS
A conversion utility in pure maintenance mode, tracking R-devel breakage release by release
◆ Current state
qtl2convert is the format-shim of the R/qtl2 ecosystem: it moves genotype probabilities and genetic maps between DOQTL, R/qtl and R/qtl2 representations. The last three releases contain no new conversion functions at all — 0.32 fixed a C string comparison flagged by CRAN, 0.34 restored attribute-clearing that R-devel 4.7 changed underneath the package, and 0.36 adjusted parallel core defaults plus a test tweak. The functional surface has been stable since 0.26 added cross2_ril_to_genril().
◆ Where it's heading
This is a package whose release cadence is driven by its dependencies, not its roadmap. Two of the last three releases exist purely because upstream R or CRAN's check suite moved; the maintainer responds within weeks and ships. The cores=0 change in 0.36 is the only user-visible behavior shift in over a year, and it landed simultaneously in sibling package qtl2fst — this is a maintainer-wide convention change, not a qtl2convert decision.
◆ Prediction
Expect the next release to be triggered by another R-devel or CRAN check change rather than a feature request, following the same pattern as 0.32 and 0.34.
scimesh
5.0ANALYTICS
A C++ mesh renderer grinding through CRAN's gate, one policy fix at a time
◆ Current state
scimesh is a C++ scientific mesh rendering library with an R binding, released in tight bursts by the dfsp-spirit neuroimaging group. The last month is dominated by CRAN admission work: stripped debug symbols, assert removal in vendored third-party code, vignette index fixes. Around that compliance grind sit genuine additions — an rgl-to-scimesh auto-conversion path, a camera_orbit helper for video, contrast as a render option.
◆ Where it's heading
The tag stream is non-monotonic — 0.2.5, 0.2.3 and 0.2.6 land within 40 seconds of each other, and 0.2.8 precedes nothing — so version order here says nothing about what shipped when. Read as a whole, the arc is a C++ codebase being domesticated for R distribution: the rendering features are largely settled, and the effort has moved to making an >5MB-adjacent C++ package survive R CMD check --as-cran. The R vignette has been restructured twice in three weeks.
◆ Prediction
Expect continued CRAN-review round-trips at 0.3.x until acceptance, with feature work confined to the CLI renderer examples rather than the core library.
Alternatives to qtl2convert and scimesh
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either qtl2convert or scimesh.
susier
Fine-mapping workhorse susieR spends its releases hunting null-effect trimming bugs
UCell
A rank-based gene signature scorer that has grown by adapting to whatever object format single-cell R uses next
detectseparation
A diagnostic package that generalized past its own name, then learned to say which kind of separation it found
brglm2
A bias-reduction package reaches 1.0 by adding an estimator built for high-dimensional logistic regression
bayestools
The JAGS toolkit under RoBMA, shipping the standardization machinery its downstream rewrite needed
See all qtl2convert alternatives → · See all scimesh alternatives →
Recent activity from qtl2convert and scimesh
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 4d agoscimeshVersion 0.3.2 -- CRAN review fixes
- 18d agoscimeshVersion 0.2.8 -- Changes for CRAN submission only
- 18d agoscimeshVersion 0.2.7 -- Small improvements
- 1mo agoqtl2convertcores=0 now leaves one core free instead of taking all
- 1mo agoscimeshVersion 0.2.5 -- Fix CRAN checks
- 1mo agoscimeshVersion 0.2.3 -- Convenience Image Ops
- 1mo agoscimeshVersion 0.2.6 -- Add contrast render option
- 2mo agoqtl2convertAttribute-clearing fix for R-devel 4.7
- 3mo agoqtl2convertC string comparison fix in encode_geno()
- 2y agoqtl2convertBug fix in probs_doqtl_to_qtl2()
- 4y agoqtl2convertMaintenance release for a NEWS.md typo
- 4y agoqtl2convertAdds cross2_ril_to_genril() for RIL cross conversion
Frequently asked questions
What is the difference between qtl2convert and scimesh?
They serve adjacent needs but don't currently overlap on shipped themes. scimesh is currently shipping more aggressively (velocity 5.0 vs 0.0), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is qtl2convert better than scimesh?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. scimesh is currently shipping more aggressively (velocity 5.0 vs 0.0), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to qtl2convert?
Top qtl2convert alternatives in Analytics are ranked by recent ship velocity. Browse the "qtl2convert alternatives" section above for the current picks, or visit /alternatives/qtl2convert for the full list with editorial commentary on each.
What are the best alternatives to scimesh?
Top scimesh alternatives in Analytics are ranked by recent ship velocity. Browse the "scimesh alternatives" section above for the current picks, or visit /alternatives/scimesh for the full list with editorial commentary on each.