arulesViz
arulesViz finished its move to ggplot2 and has been coasting on maintenance since.
Comparison · Analytics
qtl vs ravetools
A side-by-side editorial comparison of qtl and ravetools — release velocity, themes, recent moves, and the top alternatives to consider.
qtl vs ravetools: at a glance
What is qtl?
R/qtl is in pure custodial mode: every recent release answers a compiler, not a user
R/qtl is the long-established R package for QTL mapping in experimental crosses, covering interval mapping, composite interval mapping, multiple-QTL model fitting and the associated cross data formats. Nothing in the recent release history adds capability. Version 1.74 removes an include that started warning on CRAN, 1.72 improves an error message in cim(), and 1.70 migrates the C code from Calloc/Realloc/Free to their R_-prefixed equivalents for R-devel.
What is ravetools?
RAVE's signal-processing toolkit taught base R graphics to render lit 3D brain meshes.
ravetools supplies the signal processing and now the rendering primitives behind RAVE, a suite for analyzing intracranial electroencephalography. Its earlier releases built out Matlab-equivalent filtering, Welch spectra and wavelet tooling; 0.2.6 changes register entirely, adding plot_mesh_dotcloud and plot_mesh_polygon to draw 3D surface meshes in base R graphics with no rgl dependency, plus arbitrary clipping planes and per-mesh alpha.
qtl vs ravetools: editorial side-by-side
qtl
0.0ANALYTICS
R/qtl is in pure custodial mode: every recent release answers a compiler, not a user
◆ Current state
R/qtl is the long-established R package for QTL mapping in experimental crosses, covering interval mapping, composite interval mapping, multiple-QTL model fitting and the associated cross data formats. Nothing in the recent release history adds capability. Version 1.74 removes an include that started warning on CRAN, 1.72 improves an error message in cim(), and 1.70 migrates the C code from Calloc/Realloc/Free to their R_-prefixed equivalents for R-devel.
◆ Where it's heading
The package is being maintained, not developed. The work divides cleanly into keeping the compiled code building against successive R and toolchain versions, and fixing narrow bugs reported through the issue tracker. The C-level migrations in particular are compliance with R's tightening of its C interface rather than anything chosen. Users should read the stability as maturity: the analysis surface has been fixed for years and the maintainer is keeping it installable.
◆ Prediction
R has continued to restrict its non-API C entry points, and this package has already made two such migrations, so further compile-time compliance work is the most likely content of the next release.
ravetools
0.0ANALYTICS
RAVE's signal-processing toolkit taught base R graphics to render lit 3D brain meshes.
◆ Current state
ravetools supplies the signal processing and now the rendering primitives behind RAVE, a suite for analyzing intracranial electroencephalography. Its earlier releases built out Matlab-equivalent filtering, Welch spectra and wavelet tooling; 0.2.6 changes register entirely, adding plot_mesh_dotcloud and plot_mesh_polygon to draw 3D surface meshes in base R graphics with no rgl dependency, plus arbitrary clipping planes and per-mesh alpha.
◆ Where it's heading
The package is absorbing the visualization layer that RAVE previously delegated to WebGL-backed renderers, and doing it in a way that works in headless and figure-generating contexts. Exporting ensure_mesh3d to coerce mesh3d, ieegio_surface, fs.surface and surf.asc into one canonical form makes ravetools the convergence point for surface formats across the wider toolchain — the sibling ieegio package shipped its own base R plot method within minutes of this release.
◆ Prediction
Expect the base R renderers to pick up the features rgl users would miss next — richer materials, labeling and camera control — and for more of the RAVE stack to route surface handling through ensure_mesh3d.
Alternatives to qtl and ravetools
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either qtl or ravetools.
EvoPhylo
EvoPhylo added BEAST2 alongside MrBayes, then went quiet for two years.
treespace
treespace ships once every year or two, and only when CRAN or a user forces it.
Rpath
Rpath 1.1.0 learns to read Ecopath's own files, easing migration off the desktop tool.
TAF
TAF keeps turning ICES stock assessments into reproducible, dependency-pinned projects.
parallelDist
parallelDist is in pure preservation mode — one build fix every few years.
See all qtl alternatives → · See all ravetools alternatives →
Recent activity from qtl and ravetools
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 2mo agoravetools3D mesh rendering arrives in base R, without rgl ⚡
- 8mo agoqtlRemove R_ext/PrtUtil.h include flagged by CRAN
- 8mo agoqtlClearer cim() error when multiple phenotypes are passed
- 1y agoravetoolsravetools 0.2.1
- 1y agoqtlC memory calls migrated to R_Calloc/R_Realloc/R_Free
- 2y agoqtlFix Rprintf call and remaining compiler warnings
- 2y agoqtlFix summary.scanone() thresholds and csvs phenotype reading
- 3y agoqtlFix addint()/addcovarint() with X chromosome QTL and missing phenotypes
- 3y agoravetoolsStimulation interpolation and faster quantiles
Frequently asked questions
What is the difference between qtl and ravetools?
They serve adjacent needs but don't currently overlap on shipped themes. qtl and ravetools are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is qtl better than ravetools?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. qtl and ravetools are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to qtl?
Top qtl alternatives in Analytics are ranked by recent ship velocity. Browse the "qtl alternatives" section above for the current picks, or visit /alternatives/qtl-r for the full list with editorial commentary on each.
What are the best alternatives to ravetools?
Top ravetools alternatives in Analytics are ranked by recent ship velocity. Browse the "ravetools alternatives" section above for the current picks, or visit /alternatives/ravetools-r for the full list with editorial commentary on each.