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qqman vs xts

A side-by-side editorial comparison of qqman and xts — release velocity, themes, recent moves, and the top alternatives to consider.

qqman vs xts: at a glance

Featureqqmanxts
SectorAnalyticsAnalytics
Velocity score0.00.0
Sparks · 30d00
Top themesgwas, genomics, manhattan-plot, visualizationr, time-series, finance, c-api
Last editorial update1h ago5h ago
WebsiteVisit →Visit →

What is qqman?

The Manhattan-plot package for GWAS results, finished and dormant since 2017.

qqman does two things: manhattan() and qq() plots for genome-wide association study results. Its six visible releases run from 2014 to a single 2017 packaging fix, and the last release with any user-facing change shipped in 2015. The archive is non-monotonic — a 0.0.0 tag published after 0.1.1 archives the pre-package standalone script — so version order and publication order disagree.

Read the full qqman trajectory →

What is xts?

xts is finished software, and its releases now track R's C API more than user requests.

xts is the time-series class underpinning much of R's financial stack, and it behaves like infrastructure: the visible releases are bug fixes, plotting repairs and conformance work. A recurring thread is removing calls R no longer considers public — SET_TYPEOF in 0.14.0 and 0.14.1, then ATTRIB() and SET_ATTRIB() in 0.14.2. Feature additions are rare and small, the last cluster being open-ended time-of-day subsetting and na.fill performance in 0.13.0.

Read the full xts trajectory →

qqman vs xts: editorial side-by-side

Q
qqman
ANALYTICS
0.0

The Manhattan-plot package for GWAS results, finished and dormant since 2017.

◆ Current state

qqman does two things: manhattan() and qq() plots for genome-wide association study results. Its six visible releases run from 2014 to a single 2017 packaging fix, and the last release with any user-facing change shipped in 2015. The archive is non-monotonic — a 0.0.0 tag published after 0.1.1 archives the pre-package standalone script — so version order and publication order disagree.

◆ Where it's heading

The real development window was 2014 to 2015. The 0.1.2 release did the substantive work, replacing the assumption that SNPs are evenly distributed across chromosomes and handing users control of axis limits, labels and log transformation; 0.1.3 then added annotation by p-value threshold and top-SNP-per-chromosome. After that the package stops. Notably, the archival 0.0.0 entry records that the original script had confidence intervals on QQ plots and richer highlighting than the released package ever regained.

◆ Prediction

With one packaging fix in the last decade, these entries support no prediction of further releases. The package reads as complete for its narrow purpose rather than abandoned mid-arc.

X
xts
ANALYTICS
0.0

xts is finished software, and its releases now track R's C API more than user requests.

◆ Current state

xts is the time-series class underpinning much of R's financial stack, and it behaves like infrastructure: the visible releases are bug fixes, plotting repairs and conformance work. A recurring thread is removing calls R no longer considers public — SET_TYPEOF in 0.14.0 and 0.14.1, then ATTRIB() and SET_ATTRIB() in 0.14.2. Feature additions are rare and small, the last cluster being open-ended time-of-day subsetting and na.fill performance in 0.13.0.

◆ Where it's heading

Two forces drive releases. R core keeps narrowing its public C API, and xts keeps rewriting internals to stay inside it; separately, ggplot-era changes elsewhere in the ecosystem surface plotting bugs that get fixed one report at a time. Nearly every entry credits an outside reporter, which is what maintenance of a dependency this widely used looks like.

◆ Prediction

Further C API conformance work is the safest expectation, since two consecutive releases have each removed a different non-API entry point and R has continued tightening that boundary.

Alternatives to qqman and xts

Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either qqman or xts.

See all qqman alternatives → · See all xts alternatives →

Recent activity from qqman and xts

Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.

  1. 5mo agoxtsmulti.panel plots beyond 8 columns; SET_TYPEOF removed from C
  2. 5mo agoxtsATTRIB removed from C; rollapply.xts accepts vector widths
  3. 2y agoxtsMulti-panel event lines; first SET_TYPEOF replacement
  4. 2y agoxtstclass changes now alter index values; log-scale y-axis added
  5. 3y agoxtsUpdate path for pre-0.12 objects missing index attributes
  6. 3y agoxtsOpen-ended time-of-day subsetting; fast scalar na.fill
  7. 9y agoqqmanREADME image path fix for pandoc
  8. 11y agoqqmanAnnotate SNPs by p-value threshold or per-chromosome top hit
  9. 11y agoqqmanChromosome ticks stop assuming even SNP spacing; axis control opens up
  10. 12y agoqqmanArchival tag for the pre-package standalone script
  11. 12y agoqqmanVignette touch-up
  12. 12y agoqqmanZenodo archival tag, no code change

Frequently asked questions

What is the difference between qqman and xts?

They serve adjacent needs but don't currently overlap on shipped themes. qqman and xts are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.

Is qqman better than xts?

Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. qqman and xts are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.

What are the best alternatives to qqman?

Top qqman alternatives in Analytics are ranked by recent ship velocity. Browse the "qqman alternatives" section above for the current picks, or visit /alternatives/qqman-r for the full list with editorial commentary on each.

What are the best alternatives to xts?

Top xts alternatives in Analytics are ranked by recent ship velocity. Browse the "xts alternatives" section above for the current picks, or visit /alternatives/xts-r for the full list with editorial commentary on each.