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qqman vs r5r

A side-by-side editorial comparison of qqman and r5r — release velocity, themes, recent moves, and the top alternatives to consider.

qqman vs r5r: at a glance

Featureqqmanr5r
SectorAnalyticsAnalytics
Velocity score0.00.0
Sparks · 30d00
Top themesgwas, genomics, manhattan-plot, visualizationtransport-accessibility, routing, gtfs, java
Last editorial update55m ago1h ago
WebsiteVisit →Visit →

What is qqman?

The Manhattan-plot package for GWAS results, finished and dormant since 2017.

qqman does two things: manhattan() and qq() plots for genome-wide association study results. Its six visible releases run from 2014 to a single 2017 packaging fix, and the last release with any user-facing change shipped in 2015. The archive is non-monotonic — a 0.0.0 tag published after 0.1.1 archives the pre-package standalone script — so version order and publication order disagree.

Read the full qqman trajectory →

What is r5r?

r5r's jump to JDK 21 fixed Apple Silicon and broke everyone's toolchain at once.

r5r runs Conveyal's R5 routing engine from R for multimodal travel-time matrices, accessibility measures and isochrones. The current line requires JDK 21 and R5 v7.1, stores the engine jar under a managed user directory, and detects when a chosen date has no transit service instead of returning silent nonsense. Isochrones can now be returned as polygons rather than lines.

Read the full r5r trajectory →

qqman vs r5r: editorial side-by-side

Q
qqman
ANALYTICS
0.0

The Manhattan-plot package for GWAS results, finished and dormant since 2017.

◆ Current state

qqman does two things: manhattan() and qq() plots for genome-wide association study results. Its six visible releases run from 2014 to a single 2017 packaging fix, and the last release with any user-facing change shipped in 2015. The archive is non-monotonic — a 0.0.0 tag published after 0.1.1 archives the pre-package standalone script — so version order and publication order disagree.

◆ Where it's heading

The real development window was 2014 to 2015. The 0.1.2 release did the substantive work, replacing the assumption that SNPs are evenly distributed across chromosomes and handing users control of axis limits, labels and log transformation; 0.1.3 then added annotation by p-value threshold and top-SNP-per-chromosome. After that the package stops. Notably, the archival 0.0.0 entry records that the original script had confidence intervals on QQ plots and richer highlighting than the released package ever regained.

◆ Prediction

With one packaging fix in the last decade, these entries support no prediction of further releases. The package reads as complete for its narrow purpose rather than abandoned mid-arc.

R
r5r
ANALYTICS
0.0

r5r's jump to JDK 21 fixed Apple Silicon and broke everyone's toolchain at once.

◆ Current state

r5r runs Conveyal's R5 routing engine from R for multimodal travel-time matrices, accessibility measures and isochrones. The current line requires JDK 21 and R5 v7.1, stores the engine jar under a managed user directory, and detects when a chosen date has no transit service instead of returning silent nonsense. Isochrones can now be returned as polygons rather than lines.

◆ Where it's heading

Development alternates between tracking upstream R5 and smoothing the rough edges its Java dependency creates. The v2.0 release was the pivotal one: raising the JDK floor was a breaking change, but it is what resolved the Mac ARM incompatibility and unblocked users on modern hardware. Since then the work has returned to routing outputs and error handling.

◆ Prediction

Expect further upstream R5 tracking plus incremental isochrone and accessibility options; the JDK floor has just been reset, so another runtime break is unlikely soon.

Alternatives to qqman and r5r

Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either qqman or r5r.

See all qqman alternatives → · See all r5r alternatives →

Recent activity from qqman and r5r

Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.

  1. 1y agor5rPolygon isochrones and empty-service detection
  2. 1y agor5rJDK 21 requirement lands, fixing Apple Silicon support
  3. 3y agor5rAdds isochrone() with vignettes and FAQ
  4. 3y agor5rBumps R5 to 6.9 for cropped OSM network fix
  5. 9y agoqqmanREADME image path fix for pandoc
  6. 11y agoqqmanAnnotate SNPs by p-value threshold or per-chromosome top hit
  7. 11y agoqqmanChromosome ticks stop assuming even SNP spacing; axis control opens up
  8. 12y agoqqmanArchival tag for the pre-package standalone script
  9. 12y agoqqmanVignette touch-up
  10. 12y agoqqmanZenodo archival tag, no code change

Frequently asked questions

What is the difference between qqman and r5r?

They serve adjacent needs but don't currently overlap on shipped themes. qqman and r5r are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.

Is qqman better than r5r?

Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. qqman and r5r are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.

What are the best alternatives to qqman?

Top qqman alternatives in Analytics are ranked by recent ship velocity. Browse the "qqman alternatives" section above for the current picks, or visit /alternatives/qqman-r for the full list with editorial commentary on each.

What are the best alternatives to r5r?

Top r5r alternatives in Analytics are ranked by recent ship velocity. Browse the "r5r alternatives" section above for the current picks, or visit /alternatives/r5r-r for the full list with editorial commentary on each.