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Comparison · Infra & APIs

onemap vs rmake

A side-by-side editorial comparison of onemap and rmake — release velocity, themes, recent moves, and the top alternatives to consider.

onemap vs rmake: at a glance

Featureonemaprmake
SectorInfra & APIsInfra & APIs
Velocity score0.00.0
Sparks · 30d00
Top themesgenetic-mapping, linkage-analysis, genotyping-by-sequencing, mappolybuild-automation, make, reproducibility, project-workflow
Last editorial update59m ago2h ago
WebsiteVisit →Visit →

What is onemap?

A genetic-mapping mainstay that now points new users toward MAPpoly at load time

OneMap constructs genetic linkage maps for experimental crosses, and its 3.x line turned it into a hub in a wider mapping toolchain: export functions for VIEWpoly and QTLpoly, summary and interactive ordering functions adapted from MAPpoly, and retention of reference and alternative allele information from imported VCFs. The most recent release, 3.2.0 in January 2025, adds an announcement about MAPpoly to the README and the package load message, fixes a subscript-out-of-bounds warning in rf_2pts and refreshes vignettes and tests.

Read the full onemap trajectory →

What is rmake?

A Makefile generator for R projects keeps adding rule types instead of a build engine.

rmake generates GNU Make files for R analytical projects, so the dependency graph of an analysis is expressed in R and executed by make. The recent releases have widened the rule vocabulary with subdirectory and knitr rules, added stream redirection to make(), and started checking that GNU Make is actually present rather than assuming it.

Read the full rmake trajectory →

onemap vs rmake: editorial side-by-side

O
onemap
INFRA · APIS
0.0

A genetic-mapping mainstay that now points new users toward MAPpoly at load time

◆ Current state

OneMap constructs genetic linkage maps for experimental crosses, and its 3.x line turned it into a hub in a wider mapping toolchain: export functions for VIEWpoly and QTLpoly, summary and interactive ordering functions adapted from MAPpoly, and retention of reference and alternative allele information from imported VCFs. The most recent release, 3.2.0 in January 2025, adds an announcement about MAPpoly to the README and the package load message, fixes a subscript-out-of-bounds warning in rf_2pts and refreshes vignettes and tests.

◆ Where it's heading

Versions 3.0.0 and 3.1.0 were driven by a benchmarking preprint on genotyping-by-sequencing best practice, and their content follows directly: marker filtering from two-point estimates, memory reduction after filtering, and optimisation of find_bins and map_avoid_unlinked. What has happened since is signposting rather than capability — a package that spent two releases integrating with MAPpoly now tells users about it every time it loads. The pre-3.0 tags are backfilled, with versions 2.3 through 2.7 sharing a single August 2021 timestamp, so their order carries no information.

◆ Prediction

The load-message announcement suggests attention is flowing toward the MAPpoly side of the toolchain; expect maintenance and compatibility releases here rather than new mapping algorithms.

R
rmake
INFRA · APIS
0.0

A Makefile generator for R projects keeps adding rule types instead of a build engine.

◆ Current state

rmake generates GNU Make files for R analytical projects, so the dependency graph of an analysis is expressed in R and executed by make. The recent releases have widened the rule vocabulary with subdirectory and knitr rules, added stream redirection to make(), and started checking that GNU Make is actually present rather than assuming it.

◆ Where it's heading

The package is committed to delegating execution rather than reimplementing it, and the work reflects that: more rule constructors, better handling of the messy parts of shelling out, and dependency reduction. Adding hasGnuMake() and tests for its presence is the sort of change that follows real reports from users whose systems did not have it. Long command lines and filenames with spaces both got fixed, which is the usual tax on generating shell text.

◆ Prediction

Expect further rule constructors for common R document and compilation targets, and continued hardening of the generated Make syntax against unusual paths and long commands.

Alternatives to onemap and rmake

Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either onemap or rmake.

See all onemap alternatives → · See all rmake alternatives →

Recent activity from onemap and rmake

Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.

  1. 7mo agormakeGNU Make presence now checked; long command lines fixed
  2. 9mo agormakemake() gains stdout, stderr and stdin arguments
  3. 9mo agormakeSubdirectory, knitr and dependency rule constructors added
  4. 1y agoonemapMAPpoly announcement added to README and load message
  5. 3y agoonemapExports to VIEWpoly and QTLpoly; marker ordering and map summaries
  6. 3y agoonemapTwo-point marker filtering and memory reduction
  7. 4y agoonemapPSOCK and FORK parallelization choice; vcfR as an import
  8. 5y agoonemaphmm=FALSE option for ordering algorithms
  9. 5y agoonemapMDSMap dependency removed

Frequently asked questions

What is the difference between onemap and rmake?

They serve adjacent needs but don't currently overlap on shipped themes. onemap and rmake are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.

Is onemap better than rmake?

Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. onemap and rmake are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.

What are the best alternatives to onemap?

Top onemap alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "onemap alternatives" section above for the current picks, or visit /alternatives/onemap for the full list with editorial commentary on each.

What are the best alternatives to rmake?

Top rmake alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "rmake alternatives" section above for the current picks, or visit /alternatives/rmake for the full list with editorial commentary on each.