EvoPhylo
EvoPhylo added BEAST2 alongside MrBayes, then went quiet for two years.
Comparison · Analytics
oblicubes vs qtl
A side-by-side editorial comparison of oblicubes and qtl — release velocity, themes, recent moves, and the top alternatives to consider.
oblicubes vs qtl: at a glance
What is oblicubes?
A tiny grid renderer for oblique-projection cubes, complete since its first release.
oblicubes draws 3D cubes and cuboids in oblique projection as grid grobs, with ggplot2 geom wrappers and a height-matrix helper for turning elevation data into coordinates. The entire feature set arrived in the initial 0.1.2 release, adapted from coolbutuseless's isocubes and cj-holmes's isocuboids. The two releases since have widened compatibility rather than added anything.
What is qtl?
R/qtl is in pure custodial mode: every recent release answers a compiler, not a user
R/qtl is the long-established R package for QTL mapping in experimental crosses, covering interval mapping, composite interval mapping, multiple-QTL model fitting and the associated cross data formats. Nothing in the recent release history adds capability. Version 1.74 removes an include that started warning on CRAN, 1.72 improves an error message in cim(), and 1.70 migrates the C code from Calloc/Realloc/Free to their R_-prefixed equivalents for R-devel.
oblicubes vs qtl: editorial side-by-side
oblicubes
0.0ANALYTICS
A tiny grid renderer for oblique-projection cubes, complete since its first release.
◆ Current state
oblicubes draws 3D cubes and cuboids in oblique projection as grid grobs, with ggplot2 geom wrappers and a height-matrix helper for turning elevation data into coordinates. The entire feature set arrived in the initial 0.1.2 release, adapted from coolbutuseless's isocubes and cj-holmes's isocuboids. The two releases since have widened compatibility rather than added anything.
◆ Where it's heading
The package is finished and its maintainer is treating it that way. 1.0.0 removed the R 4.1 native pipe from examples specifically so earlier R versions could use it — reaching backward, not forward — and added image alt text. The only change since is swapping a deprecated dplyr call in examples.
◆ Prediction
Expect nothing beyond occasional dependency deprecation fixes; the release pattern shows a small, deliberately complete package being kept installable.
qtl
0.0ANALYTICS
R/qtl is in pure custodial mode: every recent release answers a compiler, not a user
◆ Current state
R/qtl is the long-established R package for QTL mapping in experimental crosses, covering interval mapping, composite interval mapping, multiple-QTL model fitting and the associated cross data formats. Nothing in the recent release history adds capability. Version 1.74 removes an include that started warning on CRAN, 1.72 improves an error message in cim(), and 1.70 migrates the C code from Calloc/Realloc/Free to their R_-prefixed equivalents for R-devel.
◆ Where it's heading
The package is being maintained, not developed. The work divides cleanly into keeping the compiled code building against successive R and toolchain versions, and fixing narrow bugs reported through the issue tracker. The C-level migrations in particular are compliance with R's tightening of its C interface rather than anything chosen. Users should read the stability as maturity: the analysis surface has been fixed for years and the maintainer is keeping it installable.
◆ Prediction
R has continued to restrict its non-API C entry points, and this package has already made two such migrations, so further compile-time compliance work is the most likely content of the next release.
Alternatives to oblicubes and qtl
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either oblicubes or qtl.
treespace
treespace ships once every year or two, and only when CRAN or a user forces it.
Rpath
Rpath 1.1.0 learns to read Ecopath's own files, easing migration off the desktop tool.
TAF
TAF keeps turning ICES stock assessments into reproducible, dependency-pinned projects.
parallelDist
parallelDist is in pure preservation mode — one build fix every few years.
cairo
Cairo finally catches R's graphics engine, all the way to GE API 16.
See all oblicubes alternatives → · See all qtl alternatives →
Recent activity from oblicubes and qtl
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 6mo agooblicubesExamples updated to dplyr::reframe()
- 8mo agoqtlRemove R_ext/PrtUtil.h include flagged by CRAN
- 8mo agoqtlClearer cim() error when multiple phenotypes are passed
- 1y agooblicubesR 4.1 pipe removed from examples; image alt text added
- 1y agoqtlC memory calls migrated to R_Calloc/R_Realloc/R_Free
- 2y agoqtlFix Rprintf call and remaining compiler warnings
- 2y agoqtlFix summary.scanone() thresholds and csvs phenotype reading
- 3y agoqtlFix addint()/addcovarint() with X chromosome QTL and missing phenotypes
- 3y agooblicubesInitial release: oblique-projection cube and cuboid grobs
Frequently asked questions
What is the difference between oblicubes and qtl?
They serve adjacent needs but don't currently overlap on shipped themes. oblicubes and qtl are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is oblicubes better than qtl?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. oblicubes and qtl are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to oblicubes?
Top oblicubes alternatives in Analytics are ranked by recent ship velocity. Browse the "oblicubes alternatives" section above for the current picks, or visit /alternatives/oblicubes-r for the full list with editorial commentary on each.
What are the best alternatives to qtl?
Top qtl alternatives in Analytics are ranked by recent ship velocity. Browse the "qtl alternatives" section above for the current picks, or visit /alternatives/qtl-r for the full list with editorial commentary on each.