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gtfstools vs qqman

A side-by-side editorial comparison of gtfstools and qqman — release velocity, themes, recent moves, and the top alternatives to consider.

gtfstools vs qqman: at a glance

Featuregtfstoolsqqman
SectorAnalyticsAnalytics
Velocity score0.00.0
Sparks · 30d00
Top themesgtfs, public-transport, geospatial, r-packagegwas, genomics, manhattan-plot, visualization
Last editorial update1h ago50m ago
WebsiteVisit →Visit →

What is gtfstools?

gtfstools stopped guarding its own object model and started accepting everyone else's.

gtfstools reads, edits, filters and validates GTFS public transport feeds in R on a data.table backend. Since 1.3.0 it accepts GTFS objects produced by other packages such as gtfsio and tidytransit, converting them through an as_dt_gtfs() generic. Validation runs MobilityData's canonical validator, now supported through v6.0.0.

Read the full gtfstools trajectory →

What is qqman?

The Manhattan-plot package for GWAS results, finished and dormant since 2017.

qqman does two things: manhattan() and qq() plots for genome-wide association study results. Its six visible releases run from 2014 to a single 2017 packaging fix, and the last release with any user-facing change shipped in 2015. The archive is non-monotonic — a 0.0.0 tag published after 0.1.1 archives the pre-package standalone script — so version order and publication order disagree.

Read the full qqman trajectory →

gtfstools vs qqman: editorial side-by-side

G
gtfstools
ANALYTICS
0.0

gtfstools stopped guarding its own object model and started accepting everyone else's.

◆ Current state

gtfstools reads, edits, filters and validates GTFS public transport feeds in R on a data.table backend. Since 1.3.0 it accepts GTFS objects produced by other packages such as gtfsio and tidytransit, converting them through an as_dt_gtfs() generic. Validation runs MobilityData's canonical validator, now supported through v6.0.0.

◆ Where it's heading

The package built out a wide function surface first — filters, geometry conversion, speed and duration calculations — then turned outward. Delegating validation to MobilityData's validator and accepting other packages' objects both trade self-sufficiency for a position inside the wider GTFS ecosystem. Deprecations are handled slowly, with old behaviour left as the default for a release or more.

◆ Prediction

Expect continued validator version tracking and further completion of the deprecation cycle around filter_by_stop_id()'s full_trips behaviour.

Q
qqman
ANALYTICS
0.0

The Manhattan-plot package for GWAS results, finished and dormant since 2017.

◆ Current state

qqman does two things: manhattan() and qq() plots for genome-wide association study results. Its six visible releases run from 2014 to a single 2017 packaging fix, and the last release with any user-facing change shipped in 2015. The archive is non-monotonic — a 0.0.0 tag published after 0.1.1 archives the pre-package standalone script — so version order and publication order disagree.

◆ Where it's heading

The real development window was 2014 to 2015. The 0.1.2 release did the substantive work, replacing the assumption that SNPs are evenly distributed across chromosomes and handing users control of axis limits, labels and log transformation; 0.1.3 then added annotation by p-value threshold and top-SNP-per-chromosome. After that the package stops. Notably, the archival 0.0.0 entry records that the original script had confidence intervals on QQ plots and richer highlighting than the released package ever regained.

◆ Prediction

With one packaging fix in the last decade, these entries support no prediction of further releases. The package reads as complete for its narrow purpose rather than abandoned mid-arc.

Alternatives to gtfstools and qqman

Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either gtfstools or qqman.

See all gtfstools alternatives → · See all qqman alternatives →

Recent activity from gtfstools and qqman

Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.

  1. 1y agogtfstoolsSupports canonical GTFS validator v5 and v6
  2. 1y agogtfstoolsAccepts GTFS objects from gtfsio and tidytransit
  3. 3y agogtfstoolsValidation delegated to MobilityData's canonical validator
  4. 4y agogtfstoolsAdds time-of-day, weekday and frequency filtering functions
  5. 4y agogtfstoolsEstablishes the core GTFS filtering and sf conversion family
  6. 9y agoqqmanREADME image path fix for pandoc
  7. 11y agoqqmanAnnotate SNPs by p-value threshold or per-chromosome top hit
  8. 11y agoqqmanChromosome ticks stop assuming even SNP spacing; axis control opens up
  9. 12y agoqqmanArchival tag for the pre-package standalone script
  10. 12y agoqqmanVignette touch-up
  11. 12y agoqqmanZenodo archival tag, no code change

Frequently asked questions

What is the difference between gtfstools and qqman?

They serve adjacent needs but don't currently overlap on shipped themes. gtfstools and qqman are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.

Is gtfstools better than qqman?

Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. gtfstools and qqman are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.

What are the best alternatives to gtfstools?

Top gtfstools alternatives in Analytics are ranked by recent ship velocity. Browse the "gtfstools alternatives" section above for the current picks, or visit /alternatives/gtfstools-r for the full list with editorial commentary on each.

What are the best alternatives to qqman?

Top qqman alternatives in Analytics are ranked by recent ship velocity. Browse the "qqman alternatives" section above for the current picks, or visit /alternatives/qqman-r for the full list with editorial commentary on each.