paleobuddy
paleobuddy can now simulate trait-dependent diversification, not just birth-death.
Comparison · Analytics
grex vs tidytab
A side-by-side editorial comparison of grex and tidytab — release velocity, themes, recent moves, and the top alternatives to consider.
grex vs tidytab: at a glance
What is grex?
grex is a lookup table with a version number — it ships when the annotation moves.
grex converts the deprecated Ensembl gene IDs found in GTEx data into current gene symbols and identifiers, using org.Hs.eg.db as its reference. Its value is entirely in that bundled reference data, so a release either refreshes the mapping or does nothing to it. The 2025 release does nothing to it: GitHub Actions for the docs site, a check-note fix, and a smaller vignette.
What is tidytab?
A young tabulation helper whose first releases are all dependency modernisation
tidytab is a small R package for tidyverse-style tabulation, three releases into its public life. Nothing so far has added functionality: 0.2.0 fixed a cumulative-percentage calculation and moved to the base R pipe, and 0.3.0 swapped a retired purrr function for tidyr::expand_grid. The one substantive user-facing item in the history is the cumulative percentage fix.
grex vs tidytab: editorial side-by-side
grex
0.0ANALYTICS
grex is a lookup table with a version number — it ships when the annotation moves.
◆ Current state
grex converts the deprecated Ensembl gene IDs found in GTEx data into current gene symbols and identifiers, using org.Hs.eg.db as its reference. Its value is entirely in that bundled reference data, so a release either refreshes the mapping or does nothing to it. The 2025 release does nothing to it: GitHub Actions for the docs site, a check-note fix, and a smaller vignette.
◆ Where it's heading
The annotation refreshes stopped. Between 2017 and 2019 the package tracked org.Hs.eg.db through four versions and added the GTEx V7 identifier set; since then the reference has stood still while the releases turned to packaging. That gap matters more here than it would elsewhere — a stale mapping table silently returns outdated symbols rather than failing, so the package's core asset ages invisibly.
◆ Prediction
Nothing in these entries signals a planned data refresh, and the six-year pattern suggests the next release will again be infrastructure. Users needing current annotations should check which org.Hs.eg.db version is bundled rather than assume the version number reflects it.
tidytab
0.0ANALYTICS
A young tabulation helper whose first releases are all dependency modernisation
◆ Current state
tidytab is a small R package for tidyverse-style tabulation, three releases into its public life. Nothing so far has added functionality: 0.2.0 fixed a cumulative-percentage calculation and moved to the base R pipe, and 0.3.0 swapped a retired purrr function for tidyr::expand_grid. The one substantive user-facing item in the history is the cumulative percentage fix.
◆ Where it's heading
The package is being brought up to current tidyverse conventions by a wave of first-time contributors — six of them in 0.2.0 alone — rather than developed by a sustained maintainer effort. That makes the near-term direction predictable and narrow: retire deprecated idioms, keep CRAN checks clean. There is not yet enough history to say what the package intends to become.
◆ Prediction
With deprecated tidyselect and purrr usage now cleared, the remaining work of this kind is thin, so the next release will show whether the contributor interest converts into new tabulation features or the package settles at its current surface.
Alternatives to grex and tidytab
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either grex or tidytab.
geodist
geodist stays dependency-free and fast, and warns you when 'cheap' distances stop being honest.
errors
errors keeps making uncertainty print the way each scientific field expects.
CMAQ
CMAQ went global in v5.5, and has been patching that surface ever since.
enpls
enpls has not changed its statistics since 2016 — only its website, twice.
protr
protr's feature set is finished; the work now is surviving Bioconductor's churn.
See all grex alternatives → · See all tidytab alternatives →
Recent activity from grex and tidytab
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 7mo agotidytabpurrr::cross2() replaced with tidyr::expand_grid()
- 8mo agotidytabCumulative percentage fixed; base pipe replaces magrittr
- 9mo agotidytabNEWS.md added to track changes
- 1y agogrexgrex 1.9.1: pkgdown on Actions, smaller vignette
- 7y agogrexgrex 1.9 refreshes the reference to org.Hs.eg.db 3.8.2
- 8y agogrexgrex 1.8 adds GTEx V7 IDs, updates to org.Hs.eg.db 3.6.0
- 8y agogrexgrex 1.7 updates the reference to org.Hs.eg.db 3.4.2
- 8y agogrexgrex 1.6 drops Google Fonts from vignettes
- 9y agogrexgrex 1.5 adds a pkgdown site and refreshes the reference
Frequently asked questions
What is the difference between grex and tidytab?
They serve adjacent needs but don't currently overlap on shipped themes. grex and tidytab are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is grex better than tidytab?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. grex and tidytab are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to grex?
Top grex alternatives in Analytics are ranked by recent ship velocity. Browse the "grex alternatives" section above for the current picks, or visit /alternatives/grex-r for the full list with editorial commentary on each.
What are the best alternatives to tidytab?
Top tidytab alternatives in Analytics are ranked by recent ship velocity. Browse the "tidytab alternatives" section above for the current picks, or visit /alternatives/tidytab-r for the full list with editorial commentary on each.