nflreadr
The nflverse data loader, whose releases are dictated by the NFL calendar and CRAN's archive policy
Comparison · Analytics
glmbayes vs qtl2convert
A side-by-side editorial comparison of glmbayes and qtl2convert — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r-package
glmbayes vs qtl2convert: at a glance
What is glmbayes?
A GPU-accelerated Bayesian GLM package buys its way into the standard R Bayesian toolchain
glmbayes fits Bayesian generalized linear models with optional OpenCL acceleration. The last four months moved it from a package with its own vocabulary to one that answers the insight and bayestestR generics the rest of the R Bayesian ecosystem is built on, while pushing the OpenCL kernels out into a separate nmathopencl dependency that carries CRAN Windows binaries. It returned to CRAN in August after an archival over a configure policy issue.
What is qtl2convert?
A conversion utility in pure maintenance mode, tracking R-devel breakage release by release
qtl2convert is the format-shim of the R/qtl2 ecosystem: it moves genotype probabilities and genetic maps between DOQTL, R/qtl and R/qtl2 representations. The last three releases contain no new conversion functions at all — 0.32 fixed a C string comparison flagged by CRAN, 0.34 restored attribute-clearing that R-devel 4.7 changed underneath the package, and 0.36 adjusted parallel core defaults plus a test tweak. The functional surface has been stable since 0.26 added cross2_ril_to_genril().
glmbayes vs qtl2convert: editorial side-by-side
glmbayes
6.3ANALYTICS
A GPU-accelerated Bayesian GLM package buys its way into the standard R Bayesian toolchain
◆ Current state
glmbayes fits Bayesian generalized linear models with optional OpenCL acceleration. The last four months moved it from a package with its own vocabulary to one that answers the insight and bayestestR generics the rest of the R Bayesian ecosystem is built on, while pushing the OpenCL kernels out into a separate nmathopencl dependency that carries CRAN Windows binaries. It returned to CRAN in August after an archival over a configure policy issue.
◆ Where it's heading
The arc is about removing reasons not to use it. GPU support was previously blocked on Windows because the OpenCL kernels were vendored; splitting them into a CRAN package with binaries fixed that. The ecosystem work does the same thing for tooling — a glmb fit now responds to get_parameters, get_priors, simulate_prior and check_prior, so it drops into workflows built around easystats rather than requiring its own. The CRAN archival and the configure fixes that followed show how much of the effort goes into distribution rather than modelling.
◆ Prediction
get_priors() returning the full prior specification rather than a marginal table is the kind of detail that invites further bayestestR integration, and the diagnostic surface is the least built-out part of what has shipped so far.
qtl2convert
0.0ANALYTICS
A conversion utility in pure maintenance mode, tracking R-devel breakage release by release
◆ Current state
qtl2convert is the format-shim of the R/qtl2 ecosystem: it moves genotype probabilities and genetic maps between DOQTL, R/qtl and R/qtl2 representations. The last three releases contain no new conversion functions at all — 0.32 fixed a C string comparison flagged by CRAN, 0.34 restored attribute-clearing that R-devel 4.7 changed underneath the package, and 0.36 adjusted parallel core defaults plus a test tweak. The functional surface has been stable since 0.26 added cross2_ril_to_genril().
◆ Where it's heading
This is a package whose release cadence is driven by its dependencies, not its roadmap. Two of the last three releases exist purely because upstream R or CRAN's check suite moved; the maintainer responds within weeks and ships. The cores=0 change in 0.36 is the only user-visible behavior shift in over a year, and it landed simultaneously in sibling package qtl2fst — this is a maintainer-wide convention change, not a qtl2convert decision.
◆ Prediction
Expect the next release to be triggered by another R-devel or CRAN check change rather than a feature request, following the same pattern as 0.32 and 0.34.
Alternatives to glmbayes and qtl2convert
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either glmbayes or qtl2convert.
susier
Fine-mapping workhorse susieR spends its releases hunting null-effect trimming bugs
UCell
A rank-based gene signature scorer that has grown by adapting to whatever object format single-cell R uses next
detectseparation
A diagnostic package that generalized past its own name, then learned to say which kind of separation it found
brglm2
A bias-reduction package reaches 1.0 by adding an estimator built for high-dimensional logistic regression
bayestools
The JAGS toolkit under RoBMA, shipping the standardization machinery its downstream rewrite needed
See all glmbayes alternatives → · See all qtl2convert alternatives →
Recent activity from glmbayes and qtl2convert
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 11d agoglmbayesBack on CRAN after a configure policy fix
- 22d agoglmbayesOpenCL split out to nmathopencl; insight and bayestestR integration ⚡
- 1mo agoqtl2convertcores=0 now leaves one core free instead of taking all
- 1mo agoglmbayesMulti-response models and conjugate GLM priors
- 2mo agoqtl2convertAttribute-clearing fix for R-devel 4.7
- 3mo agoglmbayesOpenCL kernels restructured and a binomial GPU bug fixed
- 3mo agoglmbayesVersion bump for CRAN resubmission
- 3mo agoqtl2convertC string comparison fix in encode_geno()
- 1y agoglmbayesCRAN-ready beta with the core S3 interface
- 2y agoqtl2convertBug fix in probs_doqtl_to_qtl2()
- 4y agoqtl2convertMaintenance release for a NEWS.md typo
- 4y agoqtl2convertAdds cross2_ril_to_genril() for RIL cross conversion
Frequently asked questions
What is the difference between glmbayes and qtl2convert?
Both compete on the same themes — r-package — within Analytics. glmbayes is currently shipping more aggressively (velocity 6.3 vs 0.0), with 1 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is glmbayes better than qtl2convert?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. glmbayes is currently shipping more aggressively (velocity 6.3 vs 0.0), with 1 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to glmbayes?
Top glmbayes alternatives in Analytics are ranked by recent ship velocity. Browse the "glmbayes alternatives" section above for the current picks, or visit /alternatives/glmbayes for the full list with editorial commentary on each.
What are the best alternatives to qtl2convert?
Top qtl2convert alternatives in Analytics are ranked by recent ship velocity. Browse the "qtl2convert alternatives" section above for the current picks, or visit /alternatives/qtl2convert for the full list with editorial commentary on each.