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ggsurvfit vs taxizedb

A side-by-side editorial comparison of ggsurvfit and taxizedb — release velocity, themes, recent moves, and the top alternatives to consider.

ggsurvfit vs taxizedb: at a glance

Featureggsurvfittaxizedb
SectorAnalyticsAnalytics
Velocity score2.50.0
Sparks · 30d00
Top themessurvival-analysis, ggplot2, competing-risks, clinical-plotstaxonomy, biodiversity-data, sqlite, ropensci
Last editorial update3h ago1h ago
WebsiteVisit →Visit →

What is ggsurvfit?

ggsurvfit is in correctness-and-compatibility mode, not feature mode.

The package draws survival and cumulative-incidence curves on a ggplot2 grammar, with risk tables, p-values and quantile annotations. Recent releases are entirely fixes and upstream tracking: ggplot2 v4.0.0 compatibility in 2025, and a 2026 patch correcting a Gray-test p-value that could be reported for the wrong competing event.

Read the full ggsurvfit trajectory →

What is taxizedb?

Stopped trusting the cloud to prepare its taxonomic databases and does the conversion locally.

taxizedb queries taxonomic databases locally rather than through rate-limited web APIs, which is what makes it usable for millions of name lookups. Version 0.2.0 established the current design: every source stored as SQLite, no credentials or ports needed, plus name-to-ID mapping functions and ports of the core taxize verbs. The most recent release changes how those databases arrive — instead of downloading a preprocessed SQLite file from the cloud, db_download_*() now fetches raw data and converts it locally for every source, because the cloud path kept breaking.

Read the full taxizedb trajectory →

ggsurvfit vs taxizedb: editorial side-by-side

G
ggsurvfit
ANALYTICS
2.5

ggsurvfit is in correctness-and-compatibility mode, not feature mode.

◆ Current state

The package draws survival and cumulative-incidence curves on a ggplot2 grammar, with risk tables, p-values and quantile annotations. Recent releases are entirely fixes and upstream tracking: ggplot2 v4.0.0 compatibility in 2025, and a 2026 patch correcting a Gray-test p-value that could be reported for the wrong competing event.

◆ Where it's heading

The feature surface settled around 1.0.0, when risk-table alignment was exported and colour and linetype defaults became configurable. Since then the work is keeping pace with survival, ggplot2 and tidycmprsk changes, and closing cases where the plotted curve and the annotation disagreed — the p-value matched by position rather than name, confidence limits swapped for multi-state models, quantiles read off a plateau.

◆ Prediction

Expect the next release to track upstream survival or ggplot2 changes rather than add plotting features; the CDISC censoring convention adopted in Surv_CNSR() suggests further alignment with clinical data standards is the likelier direction.

T
taxizedb
ANALYTICS
0.0

Stopped trusting the cloud to prepare its taxonomic databases and does the conversion locally.

◆ Current state

taxizedb queries taxonomic databases locally rather than through rate-limited web APIs, which is what makes it usable for millions of name lookups. Version 0.2.0 established the current design: every source stored as SQLite, no credentials or ports needed, plus name-to-ID mapping functions and ports of the core taxize verbs. The most recent release changes how those databases arrive — instead of downloading a preprocessed SQLite file from the cloud, db_download_*() now fetches raw data and converts it locally for every source, because the cloud path kept breaking.

◆ Where it's heading

The package is trading convenience for independence. Each release removes another thing that has to be working elsewhere for the package to function: hosted database preparation is gone, and where a provider disappears the package documents it rather than pretending otherwise — db_download_tpl() is now defunct because The Plant List no longer exists, though previously downloaded copies still query fine. Release cadence is slow, with multi-year gaps and a maintainer handover in 2023.

◆ Prediction

Expect further releases to track data sources appearing and disappearing rather than adding features, since that has driven every recent change. Local conversion also shifts cost onto users, so build time and memory for the larger sources are the plausible next thing to need attention.

Alternatives to ggsurvfit and taxizedb

Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either ggsurvfit or taxizedb.

See all ggsurvfit alternatives → · See all taxizedb alternatives →

Recent activity from ggsurvfit and taxizedb

Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.

  1. 20d agoggsurvfitGray-test p-values matched to the plotted outcome by name
  2. 9mo agotaxizedbDatabases now built locally from raw data, not the cloud
  3. 10mo agoggsurvfitggplot2 v4.0.0 compatibility and multi-state CI label fix
  4. 2y agoggsurvfitNegative follow-up times and a cloglog transformation
  5. 2y agoggsurvfitAesthetic defaults become switchable and alignment is exported
  6. 2y agoggsurvfitConfidence limits corrected for monotonicity-reversing transforms
  7. 3y agotaxizedbPatch release for a maintainer change
  8. 3y agoggsurvfitGlue syntax in risk tables and coxph model support
  9. 5y agotaxizedbtaxa_at() retrieves ancestors at a named rank
  10. 5y agotaxizedbFixes failing tests
  11. 6y agotaxizedbSQLite everywhere, three new sources, taxize verbs ported
  12. 9y agotaxizedbTracks the dplyr split that introduced dbplyr

Frequently asked questions

What is the difference between ggsurvfit and taxizedb?

They serve adjacent needs but don't currently overlap on shipped themes. ggsurvfit is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.

Is ggsurvfit better than taxizedb?

Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. ggsurvfit is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.

What are the best alternatives to ggsurvfit?

Top ggsurvfit alternatives in Analytics are ranked by recent ship velocity. Browse the "ggsurvfit alternatives" section above for the current picks, or visit /alternatives/ggsurvfit for the full list with editorial commentary on each.

What are the best alternatives to taxizedb?

Top taxizedb alternatives in Analytics are ranked by recent ship velocity. Browse the "taxizedb alternatives" section above for the current picks, or visit /alternatives/taxizedb for the full list with editorial commentary on each.