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ggsci vs qqman

A side-by-side editorial comparison of ggsci and qqman — release velocity, themes, recent moves, and the top alternatives to consider.

ggsci vs qqman: at a glance

Featureggsciqqman
SectorAnalyticsAnalytics
Velocity score2.50.0
Sparks · 30d00
Top themescolor palettes, ggplot2, r, data visualizationgwas, genomics, manhattan-plot, visualization
Last editorial update10h ago1h ago
WebsiteVisit →Visit →

What is ggsci?

ggsci quietly became a palette mirror, then taught itself to generate colors on demand

ggsci ships ready-made ggplot2 color scales, originally journal and sci-fi palettes and now overwhelmingly terminal themes — the iTerm collection has grown past 400 entries and picks up 30 to 70 more with each sync. The one structural change in the recent run is gephi_palettes(), which generates distinct categorical colors for an arbitrary number of levels rather than serving a fixed list. Release cadence is steady, roughly every six to eight weeks.

Read the full ggsci trajectory →

What is qqman?

The Manhattan-plot package for GWAS results, finished and dormant since 2017.

qqman does two things: manhattan() and qq() plots for genome-wide association study results. Its six visible releases run from 2014 to a single 2017 packaging fix, and the last release with any user-facing change shipped in 2015. The archive is non-monotonic — a 0.0.0 tag published after 0.1.1 archives the pre-package standalone script — so version order and publication order disagree.

Read the full qqman trajectory →

ggsci vs qqman: editorial side-by-side

G
ggsci
ANALYTICS
2.5

ggsci quietly became a palette mirror, then taught itself to generate colors on demand

◆ Current state

ggsci ships ready-made ggplot2 color scales, originally journal and sci-fi palettes and now overwhelmingly terminal themes — the iTerm collection has grown past 400 entries and picks up 30 to 70 more with each sync. The one structural change in the recent run is gephi_palettes(), which generates distinct categorical colors for an arbitrary number of levels rather than serving a fixed list. Release cadence is steady, roughly every six to eight weeks.

◆ Where it's heading

Two threads run in parallel. The larger one is curation: ggsci has effectively become a distribution channel for upstream color work, adding design-system palettes (Primer, Atlassian, Bootstrap, Tailwind) and re-syncing iTerm as that project changes, including correcting existing color values when upstream moves. The smaller and more interesting one is generation — the Gephi engine sidesteps the ceiling every fixed palette has, which is what happens when a plot needs more categories than any curated set provides.

◆ Prediction

Given how much of the release notes each cycle is a mechanical upstream sync, the plausible next step is automating those syncs rather than adding another vendor palette by hand; the Gephi generator is the more likely place any genuinely new capability appears.

Q
qqman
ANALYTICS
0.0

The Manhattan-plot package for GWAS results, finished and dormant since 2017.

◆ Current state

qqman does two things: manhattan() and qq() plots for genome-wide association study results. Its six visible releases run from 2014 to a single 2017 packaging fix, and the last release with any user-facing change shipped in 2015. The archive is non-monotonic — a 0.0.0 tag published after 0.1.1 archives the pre-package standalone script — so version order and publication order disagree.

◆ Where it's heading

The real development window was 2014 to 2015. The 0.1.2 release did the substantive work, replacing the assumption that SNPs are evenly distributed across chromosomes and handing users control of axis limits, labels and log transformation; 0.1.3 then added annotation by p-value threshold and top-SNP-per-chromosome. After that the package stops. Notably, the archival 0.0.0 entry records that the original script had confidence intervals on QQ plots and richer highlighting than the released package ever regained.

◆ Prediction

With one packaging fix in the last decade, these entries support no prediction of further releases. The package reads as complete for its narrow purpose rather than abandoned mid-arc.

Alternatives to ggsci and qqman

Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either ggsci or qqman.

See all ggsci alternatives → · See all qqman alternatives →

Recent activity from ggsci and qqman

Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.

  1. 16d agoggsciggsci 5.2.0
  2. 1mo agoggsciggsci 5.1.0
  3. 4mo agoggsciggsci 5.0.0 generates categorical colors instead of serving a fixed list
  4. 4mo agoggsciggsci 4.3.0
  5. 8mo agoggsciggsci 4.2.0
  6. 9mo agoggsciggsci 4.1.0
  7. 9y agoqqmanREADME image path fix for pandoc
  8. 11y agoqqmanAnnotate SNPs by p-value threshold or per-chromosome top hit
  9. 11y agoqqmanChromosome ticks stop assuming even SNP spacing; axis control opens up
  10. 12y agoqqmanArchival tag for the pre-package standalone script
  11. 12y agoqqmanVignette touch-up
  12. 12y agoqqmanZenodo archival tag, no code change

Frequently asked questions

What is the difference between ggsci and qqman?

They serve adjacent needs but don't currently overlap on shipped themes. ggsci is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.

Is ggsci better than qqman?

Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. ggsci is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.

What are the best alternatives to ggsci?

Top ggsci alternatives in Analytics are ranked by recent ship velocity. Browse the "ggsci alternatives" section above for the current picks, or visit /alternatives/ggsci for the full list with editorial commentary on each.

What are the best alternatives to qqman?

Top qqman alternatives in Analytics are ranked by recent ship velocity. Browse the "qqman alternatives" section above for the current picks, or visit /alternatives/qqman-r for the full list with editorial commentary on each.