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Comparison · Analytics
forecasting vs scTypeEval
A side-by-side editorial comparison of forecasting and scTypeEval — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r package
forecasting vs scTypeEval: at a glance
What is forecasting?
HIDDA.forecasting is a book chapter's reproducibility artifact, not a package under development.
HIDDA.forecasting accompanies a book chapter on forecasting infectious disease counts; its vignettes reproduce the results presented there using arima, prophet, glarma, hhh4contacts and scoringRules. The 1.0.0 release states this outright — it is the version used for the chapter, pinned to CRAN package versions as of July 2018. Every release since has been a vignette rebuild against newer R and dependency versions.
What is scTypeEval?
scTypeEval judges single-cell annotations without needing a ground truth to judge them against.
scTypeEval evaluates the consistency of single-cell cell type annotations without a ground-truth reference, using pseudobulk distances, Wasserstein distances and reciprocal classification as alternative dissimilarity strategies. It cleared Bioconductor's submission process on its first cycle, moving from a 0.99.30 pre-release in April 2026 to version 1.0.0 in the Bioconductor 3.23 release a month later. It accepts matrix, Seurat and SingleCellExperiment inputs.
forecasting vs scTypeEval: editorial side-by-side
forecasting
0.0ANALYTICS
HIDDA.forecasting is a book chapter's reproducibility artifact, not a package under development.
◆ Current state
HIDDA.forecasting accompanies a book chapter on forecasting infectious disease counts; its vignettes reproduce the results presented there using arima, prophet, glarma, hhh4contacts and scoringRules. The 1.0.0 release states this outright — it is the version used for the chapter, pinned to CRAN package versions as of July 2018. Every release since has been a vignette rebuild against newer R and dependency versions.
◆ Where it's heading
The release pattern is maintenance on an eight-year cadence dictated entirely by the surrounding ecosystem: 1.1.1 rebuilt under R 4.0.4, 1.1.2 under R 4.3.2, 1.1.3 under R 4.6.1, each reporting whether the numbers moved. They mostly have not — the recurring note is minor numerical differences confined to the prophet forecasts in vignette('CHILI_prophet'). The only substantive change in the visible history is 1.1.0's methodological tidy-up of the scoring comparisons.
◆ Prediction
Nothing in these entries points to new functionality; the next release is most likely another vignette rebuild whenever a dependency change or a CRAN check failure forces one.
scTypeEval
0.0ANALYTICS
scTypeEval judges single-cell annotations without needing a ground truth to judge them against.
◆ Current state
scTypeEval evaluates the consistency of single-cell cell type annotations without a ground-truth reference, using pseudobulk distances, Wasserstein distances and reciprocal classification as alternative dissimilarity strategies. It cleared Bioconductor's submission process on its first cycle, moving from a 0.99.30 pre-release in April 2026 to version 1.0.0 in the Bioconductor 3.23 release a month later. It accepts matrix, Seurat and SingleCellExperiment inputs.
◆ Where it's heading
The visible history is short and shaped entirely by the Bioconductor pipeline — the 0.99.x series is that project's submission convention, and 1.0.0 is what acceptance looks like rather than a maturity claim by the authors. What the pre-release notes emphasise is breadth of input format and of dissimilarity strategy rather than a single recommended method, which suggests the package is positioned as a comparison harness rather than a scoring tool. Nothing in these two entries indicates work beyond getting accepted.
◆ Prediction
With only a submission cycle in the record, there is not enough here to predict a direction; the next release will most likely be whatever the Bioconductor 3.24 cycle requires, and the first post-acceptance release is what will show whether development continues.
Alternatives to forecasting and scTypeEval
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either forecasting or scTypeEval.
collinear
collinear has broken its API twice to stop making the user pick thresholds.
nert
nert put fourteen TERN datasets behind one dispatcher and called it stable.
medrobust
medrobust made its partial-identification bounds usable by giving them confidence intervals.
probmed
probmed went from one probabilistic effect size to a family of them in sixteen days.
fluxnet-package
fluxnet keeps swapping its own plumbing — first a Python downloader, now a DuckDB backend.
See all forecasting alternatives → · See all scTypeEval alternatives →
Recent activity from forecasting and scTypeEval
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1mo agoforecastingVignettes rebuilt under R 4.6.1
- 3mo agoscTypeEvalAccepted into the Bioconductor 3.23 release
- 4mo agoscTypeEvalBioconductor pre-release: ground-truth-agnostic annotation evaluation
- 2y agoforecastingVignettes rebuilt under R 4.3.2
- 5y agoforecastingVignettes rebuilt under R 4.0.4
- 7y agoforecastingStandard PIT and discretized log-normal scoring
- 7y agoforecastingThe version used for the book chapter, with pinned dependencies
Frequently asked questions
What is the difference between forecasting and scTypeEval?
Both compete on the same themes — r package — within Analytics. forecasting and scTypeEval are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is forecasting better than scTypeEval?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. forecasting and scTypeEval are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to forecasting?
Top forecasting alternatives in Analytics are ranked by recent ship velocity. Browse the "forecasting alternatives" section above for the current picks, or visit /alternatives/forecasting for the full list with editorial commentary on each.
What are the best alternatives to scTypeEval?
Top scTypeEval alternatives in Analytics are ranked by recent ship velocity. Browse the "scTypeEval alternatives" section above for the current picks, or visit /alternatives/sctypeeval for the full list with editorial commentary on each.