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Adding chemical databases with one hand while public ones close programmatic access with the other.
Comparison · Analytics
epidemics vs lobstr
A side-by-side editorial comparison of epidemics and lobstr — release velocity, themes, recent moves, and the top alternatives to consider.
epidemics vs lobstr: at a glance
What is epidemics?
epidemics swapped its C++ engine for odin — and quietly inverted how contact matrices must be passed.
epidemics ships composable compartmental model structures — default SEIR-V, Vacamole, diphtheria and Ebola — with classes for populations, interventions and vaccination campaigns. After more than two years without a release, 0.5.0 landed in July 2026 carrying both an engine migration and a breaking input-convention change. Maintainership moved to a new lead back in 0.4.0.
What is lobstr?
R's object inspector is losing its view of the internals as CRAN closes off the private C API.
lobstr exposes R's internal object representation — sizes, addresses, reference counts, abstract syntax trees. Its two most recent releases are both driven by R's move to a restricted public C API: 1.1.3 stopped reporting a vector's truelength and reworked the reference indicator into refs:n, and 1.2.0 changed what sxp(expand = "environment") shows in order to stay compliant. 1.2.0 also adds src() for exploring srcref objects.
epidemics vs lobstr: editorial side-by-side
epidemics
3.8ANALYTICS
epidemics swapped its C++ engine for odin — and quietly inverted how contact matrices must be passed.
◆ Current state
epidemics ships composable compartmental model structures — default SEIR-V, Vacamole, diphtheria and Ebola — with classes for populations, interventions and vaccination campaigns. After more than two years without a release, 0.5.0 landed in July 2026 carrying both an engine migration and a breaking input-convention change. Maintainership moved to a new lead back in 0.4.0.
◆ Where it's heading
The package's history is a sequence of deliberate breaking releases: 0.2.0 renamed every model function and vectorised the ODE models, 0.3.0 restructured the Ebola model into two levels and made replicates the default, and 0.5.0 rewrites the compiled core. The direction is toward a smaller, more declarative model definition layer with the numerical work delegated to a dedicated tool.
◆ Prediction
With the default, Vacamole and diphtheria systems now declared in odin, the Ebola model is the obvious remaining candidate for the same treatment.
lobstr
0.0ANALYTICS
R's object inspector is losing its view of the internals as CRAN closes off the private C API.
◆ Current state
lobstr exposes R's internal object representation — sizes, addresses, reference counts, abstract syntax trees. Its two most recent releases are both driven by R's move to a restricted public C API: 1.1.3 stopped reporting a vector's truelength and reworked the reference indicator into refs:n, and 1.2.0 changed what sxp(expand = "environment") shows in order to stay compliant. 1.2.0 also adds src() for exploring srcref objects.
◆ Where it's heading
The package is being rebuilt inside a shrinking window of what R permits. Each release trades some introspection depth for API conformance while trying to keep the diagnostic value intact — showing promise expressions instead of internal frame structures, replacing named with a documented refs scale. Where the constraint does not bite, development continues normally: src() is genuinely new, and the environment-binding fixes remove long-standing errors on for-loop and immediate bindings.
◆ Prediction
Expect further conformance work, since the notes describe it as ongoing, with any remaining non-API-dependent readouts either reworked or dropped as R tightens further.
Alternatives to epidemics and lobstr
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either epidemics or lobstr.
sftime
The spatiotemporal companion to sf, moving at the pace of the packages around it.
ReLTER
An interface to Europe's long-term ecosystem research network that went quiet after 2.0.
waywiser
Spatial model assessment that spent the last year on cross-platform arithmetic and CRAN rules.
taxizedb
Stopped trusting the cloud to prepare its taxonomic databases and does the conversion locally.
fellingdater
Went from estimating felling dates to doing the crossdating that produces them.
See all epidemics alternatives → · See all lobstr alternatives →
Recent activity from epidemics and lobstr
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 25d agoepidemicsODE models migrate to odin; contact matrices must no longer be transposed ⚡
- 5mo agolobstrNew src() for srcrefs; environment bindings stop erroring
- 9mo agolobstrtruelength reporting dropped for public C API compliance ⚡
- 2y agoepidemicsPeak timing and scenario comparison helpers; negative-susceptible bug fixed
- 2y agoepidemicsEbola model accepts vector inputs and defaults to 100 replicates
- 2y agoepidemicsODE models vectorised; every model function renamed
- 2y agoepidemicsFirst release: four composable compartmental model structures
- 4y agolobstrMoves to cpp11, relicensed MIT, adds experimental tree()
- 7y agolobstrPROTECT error fixed
- 7y agolobstrALTREP sizes computed correctly; obj_addr() stops side-effecting
Frequently asked questions
What is the difference between epidemics and lobstr?
They serve adjacent needs but don't currently overlap on shipped themes. epidemics is currently shipping more aggressively (velocity 3.8 vs 0.0), with 1 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is epidemics better than lobstr?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. epidemics is currently shipping more aggressively (velocity 3.8 vs 0.0), with 1 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to epidemics?
Top epidemics alternatives in Analytics are ranked by recent ship velocity. Browse the "epidemics alternatives" section above for the current picks, or visit /alternatives/epidemics for the full list with editorial commentary on each.
What are the best alternatives to lobstr?
Top lobstr alternatives in Analytics are ranked by recent ship velocity. Browse the "lobstr alternatives" section above for the current picks, or visit /alternatives/lobstr for the full list with editorial commentary on each.