nflreadr
The nflverse data loader, whose releases are dictated by the NFL calendar and CRAN's archive policy
Comparison · Analytics
ecotraj vs mmconvert
A side-by-side editorial comparison of ecotraj and mmconvert — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r-package
ecotraj vs mmconvert: at a glance
What is ecotraj?
Ecological trajectory analysis builds out its cyclical branch, largely through one contributor
ecotraj analyses ecological community trajectories through multivariate space, and since 1.0.0 has carried cyclical ecological trajectory analysis (CETA) alongside the linear methods. Recent releases add convergence plotting, cycle shift arrows, correspondence and reduced major axis functions, and now trajectory averaging — most credited to a single contributor, N. Djeghri. Several older release notes are bare pointers to NEWS rather than descriptions.
What is mmconvert?
A single-purpose mouse map interpolator that solved its problem in 2023 and has coasted since
mmconvert does one thing: interpolate between GRCm39 physical positions and the revised Cox genetic map for mouse MUGA array markers. The substantive work all landed in a burst across 2021-2023 — the initial function, the GRCm39 annotation dataset, cross2_to_grcm39(), the recomputed Cox maps and their smoothed replacement. Everything since is upkeep: a warning-message fix in 0.12, and 0.14 is a test adjustment to silence a CRAN Note with no code change at all.
ecotraj vs mmconvert: editorial side-by-side
ecotraj
0.0ANALYTICS
Ecological trajectory analysis builds out its cyclical branch, largely through one contributor
◆ Current state
ecotraj analyses ecological community trajectories through multivariate space, and since 1.0.0 has carried cyclical ecological trajectory analysis (CETA) alongside the linear methods. Recent releases add convergence plotting, cycle shift arrows, correspondence and reduced major axis functions, and now trajectory averaging — most credited to a single contributor, N. Djeghri. Several older release notes are bare pointers to NEWS rather than descriptions.
◆ Where it's heading
The centre of gravity has shifted to cycles. The 1.0.0 release introduced CETA and reworked the underlying data structures for it, and every release since extends the cyclical branch or teaches an existing function to handle cycle objects — trajectoryDistances now compares cycles using dates for time comparison, and averageTrajectories covers both trajectories and cycles. A dependency on the MannKendall package was dropped in favour of base cor.test, trimming the install footprint.
◆ Prediction
The pattern of teaching existing linear-trajectory functions to accept cycle objects has repeated across several releases, so further functions gaining cycle support is the most grounded expectation.
mmconvert
0.0ANALYTICS
A single-purpose mouse map interpolator that solved its problem in 2023 and has coasted since
◆ Current state
mmconvert does one thing: interpolate between GRCm39 physical positions and the revised Cox genetic map for mouse MUGA array markers. The substantive work all landed in a burst across 2021-2023 — the initial function, the GRCm39 annotation dataset, cross2_to_grcm39(), the recomputed Cox maps and their smoothed replacement. Everything since is upkeep: a warning-message fix in 0.12, and 0.14 is a test adjustment to silence a CRAN Note with no code change at all.
◆ Where it's heading
The package has reached the natural end state of a reference-data converter — the reference data stopped moving, so the package stopped moving. Releases now arrive roughly annually and exist to keep CRAN checks green. The 0.14 release shipped the same day as sibling qtl2convert 0.36, confirming these are batch maintenance passes across the maintainer's packages rather than independent development.
◆ Prediction
Without a new mouse genome build or a revised Cox map, the next release is likely another CRAN-check accommodation rather than new functionality.
Alternatives to ecotraj and mmconvert
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either ecotraj or mmconvert.
susier
Fine-mapping workhorse susieR spends its releases hunting null-effect trimming bugs
UCell
A rank-based gene signature scorer that has grown by adapting to whatever object format single-cell R uses next
detectseparation
A diagnostic package that generalized past its own name, then learned to say which kind of separation it found
brglm2
A bias-reduction package reaches 1.0 by adding an estimator built for high-dimensional logistic regression
bayestools
The JAGS toolkit under RoBMA, shipping the standardization machinery its downstream rewrite needed
See all ecotraj alternatives → · See all mmconvert alternatives →
Recent activity from ecotraj and mmconvert
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1mo agommconvertTest adjustment to clear a CRAN Note
- 2mo agoecotrajTrajectory averaging and cycle-aware distance comparison
- 9mo agoecotrajConvergence plots, RMA functions, and one fewer dependency
- 11mo agoecotrajTrajectory definition and convergence fixes
- 1y agommconvertFixes a malformed warning message in mmconvert()
- 1y agoecotrajECOTRAJ ver. 1.1.0
- 1y agoecotrajECOTRAJ ver. 1.0.0 ⚡
- 2y agoecotrajECOTRAJ ver. 0.1.1
- 3y agommconvertOmits X chromosome positions for sex-averaged and male maps
- 3y agommconvertCRAN release adds chromosome lengths and smoothed Cox maps
- 3y agommconvertRecomputed Cox genetic maps and combined-array support
- 4y agommconvertRepoints data sources from master to main branches
Frequently asked questions
What is the difference between ecotraj and mmconvert?
Both compete on the same themes — r-package — within Analytics. ecotraj and mmconvert are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is ecotraj better than mmconvert?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. ecotraj and mmconvert are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to ecotraj?
Top ecotraj alternatives in Analytics are ranked by recent ship velocity. Browse the "ecotraj alternatives" section above for the current picks, or visit /alternatives/ecotraj for the full list with editorial commentary on each.
What are the best alternatives to mmconvert?
Top mmconvert alternatives in Analytics are ranked by recent ship velocity. Browse the "mmconvert alternatives" section above for the current picks, or visit /alternatives/mmconvert for the full list with editorial commentary on each.