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The Manhattan-plot package for GWAS results, finished and dormant since 2017.
Comparison · Analytics
deeptime vs symengine
A side-by-side editorial comparison of deeptime and symengine — release velocity, themes, recent moves, and the top alternatives to consider.
deeptime vs symengine: at a glance
What is deeptime?
A geologic-time plotting layer that outgrew time axes and became a geology rendering toolkit.
deeptime extends ggplot2 with geological time scales, radial deep-time coordinates and phylogeny-aware geoms, and since 2.0.0 it also renders standardized FGDC/USGS geologic patterns as ggplot2 fills. The current 2.4.0 release adds geom_text_clade() for labeling clades on radial phylogenies and repairs long-standing coord_trans_xy() and scale-placement edge cases.
What is symengine?
An R symbolic-maths binding whose changelog is really the C++ core's release notes.
symengine gives R access to the SymEngine computer algebra core for symbolic expressions, matrices and sets. The tracked feed carries the upstream C++ library's releases rather than R-binding changes, so what shows here is core work: parser fixes, locale-independent double parsing, an SOVERSION bump and matrix transpose corrections. Feature growth in the core has slowed considerably since the 0.9 and 0.10 releases.
deeptime vs symengine: editorial side-by-side
deeptime
0.0ANALYTICS
A geologic-time plotting layer that outgrew time axes and became a geology rendering toolkit.
◆ Current state
deeptime extends ggplot2 with geological time scales, radial deep-time coordinates and phylogeny-aware geoms, and since 2.0.0 it also renders standardized FGDC/USGS geologic patterns as ggplot2 fills. The current 2.4.0 release adds geom_text_clade() for labeling clades on radial phylogenies and repairs long-standing coord_trans_xy() and scale-placement edge cases.
◆ Where it's heading
The package is converging on two jobs: being the canonical R renderer for stratigraphic drawing conventions, and keeping pace with ggplot2's own churn. A sustained deprecation program — gggeo_scale(), coord_geo_polar(), getScaleData(), now disparity_through_time() — is trimming the surface down to coord_geo(), coord_geo_radial() and the pattern functions. Roughly half of each recent release is ggplot2 4.0 compatibility work.
◆ Prediction
Expect disparity_through_time() and coord_geo_polar() to be removed outright in the next major version, and further geoms aimed at annotating radial phylogenies.
symengine
0.0ANALYTICS
An R symbolic-maths binding whose changelog is really the C++ core's release notes.
◆ Current state
symengine gives R access to the SymEngine computer algebra core for symbolic expressions, matrices and sets. The tracked feed carries the upstream C++ library's releases rather than R-binding changes, so what shows here is core work: parser fixes, locale-independent double parsing, an SOVERSION bump and matrix transpose corrections. Feature growth in the core has slowed considerably since the 0.9 and 0.10 releases.
◆ Where it's heading
The upstream core has moved from adding capability — serialization, a first simplify(), set types, matrix expressions, LLVM support — toward maintenance: build fixes, dependency support such as Flint3, and correctness patches. For R users the practical consequence is that new symbolic features arrive only as fast as the binding exposes them, which this feed does not report on.
◆ Prediction
Expect further upstream maintenance releases tracking LLVM and Flint versions; nothing in these notes signals a new capability push.
Alternatives to deeptime and symengine
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either deeptime or symengine.
constants
The R package for CODATA constants rebuilt its symbol table on NIST's naming so future updates stop being hand work.
austraits
The R client for AusTraits spends its releases chasing the dataset it reads.
ggdemetra
A ggplot2 layer for seasonal adjustment output, filling in one plot type at a time.
fossilsim
A fossil-record simulator that quietly grew a trait-evolution engine.
tern.rbmi
Reference-based multiple imputation tables, shipping only what CRAN checks demand.
See all deeptime alternatives → · See all symengine alternatives →
Recent activity from deeptime and symengine
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1mo agodeeptimegeom_text_clade() labels clades on radial phylogenies
- 8mo agodeeptimeArgument renames for ggplot2 4.0 parity
- 8mo agodeeptimePattern code dictionary and time-scale theming
- 1y agodeeptimegeom_text_phylo() arrives with ggplot2 4 compatibility
- 1y agodeeptimeContrast-aware label colors across the built-in scales
- 1y agosymengineLocale-independent double parsing and matrix transpose fix
- 1y agodeeptimeFGDC geologic patterns become ggplot2 fills ⚡
- 2y agosymengineFlint3 support and SBML printing fixes
- 3y agosymengineBuild fixes only, no functional change
- 3y agosymengineMatrix expressions, Intersection class and LLVM 16 support
- 4y agosymengineAdds serialization and a first simplify() implementation
- 4y agosymengineFixes MSVC2017 compilation failure
Frequently asked questions
What is the difference between deeptime and symengine?
They serve adjacent needs but don't currently overlap on shipped themes. deeptime and symengine are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is deeptime better than symengine?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. deeptime and symengine are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to deeptime?
Top deeptime alternatives in Analytics are ranked by recent ship velocity. Browse the "deeptime alternatives" section above for the current picks, or visit /alternatives/deeptime-r for the full list with editorial commentary on each.
What are the best alternatives to symengine?
Top symengine alternatives in Analytics are ranked by recent ship velocity. Browse the "symengine alternatives" section above for the current picks, or visit /alternatives/symengine-r for the full list with editorial commentary on each.