qqman
The Manhattan-plot package for GWAS results, finished and dormant since 2017.
Comparison · Analytics
fossilsim vs symengine
A side-by-side editorial comparison of fossilsim and symengine — release velocity, themes, recent moves, and the top alternatives to consider.
fossilsim vs symengine: at a glance
What is fossilsim?
A fossil-record simulator that quietly grew a trait-evolution engine.
FossilSim is a mature R package for simulating fossil records on phylogenetic trees, and its release cadence reflects that: long gaps punctuated by a single capability addition. The last four releases span three years, with the most recent being a compatibility sync to its companion Shiny front-end rather than new functionality. The core simulation surface has been stable since 2022.
What is symengine?
An R symbolic-maths binding whose changelog is really the C++ core's release notes.
symengine gives R access to the SymEngine computer algebra core for symbolic expressions, matrices and sets. The tracked feed carries the upstream C++ library's releases rather than R-binding changes, so what shows here is core work: parser fixes, locale-independent double parsing, an SOVERSION bump and matrix transpose corrections. Feature growth in the core has slowed considerably since the 0.9 and 0.10 releases.
fossilsim vs symengine: editorial side-by-side
fossilsim
0.0ANALYTICS
A fossil-record simulator that quietly grew a trait-evolution engine.
◆ Current state
FossilSim is a mature R package for simulating fossil records on phylogenetic trees, and its release cadence reflects that: long gaps punctuated by a single capability addition. The last four releases span three years, with the most recent being a compatibility sync to its companion Shiny front-end rather than new functionality. The core simulation surface has been stable since 2022.
◆ Where it's heading
The arc runs from sampling mechanics toward simulating what the organisms actually were. Version 2.2.0 taught the package to handle occurrence data for occurrence birth-death models; 2.3.0 then added trait simulation under Mk, BM and OU, which is a different kind of output than fossil ages. Since then the work has been maintenance and keeping the FossilSimShiny GUI in step, suggesting the authors consider the current model set feature-complete.
◆ Prediction
The pairing of the 2.3.3 release with a FossilSimShiny version bump points to the GUI, not the library, as where the next visible work lands. The entries do not show enough activity to predict a specific new model family.
symengine
0.0ANALYTICS
An R symbolic-maths binding whose changelog is really the C++ core's release notes.
◆ Current state
symengine gives R access to the SymEngine computer algebra core for symbolic expressions, matrices and sets. The tracked feed carries the upstream C++ library's releases rather than R-binding changes, so what shows here is core work: parser fixes, locale-independent double parsing, an SOVERSION bump and matrix transpose corrections. Feature growth in the core has slowed considerably since the 0.9 and 0.10 releases.
◆ Where it's heading
The upstream core has moved from adding capability — serialization, a first simplify(), set types, matrix expressions, LLVM support — toward maintenance: build fixes, dependency support such as Flint3, and correctness patches. For R users the practical consequence is that new symbolic features arrive only as fast as the binding exposes them, which this feed does not report on.
◆ Prediction
Expect further upstream maintenance releases tracking LLVM and Flint versions; nothing in these notes signals a new capability push.
Alternatives to fossilsim and symengine
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either fossilsim or symengine.
constants
The R package for CODATA constants rebuilt its symbol table on NIST's naming so future updates stop being hand work.
austraits
The R client for AusTraits spends its releases chasing the dataset it reads.
ggdemetra
A ggplot2 layer for seasonal adjustment output, filling in one plot type at a time.
tern.rbmi
Reference-based multiple imputation tables, shipping only what CRAN checks demand.
tern.mmrm
An MMRM tabulation package that has published nothing since its 2024 CRAN releases.
See all fossilsim alternatives → · See all symengine alternatives →
Recent activity from fossilsim and symengine
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1y agosymengineLocale-independent double parsing and matrix transpose fix
- 2y agofossilsimCompatibility bump for FossilSimShiny 1.1.2
- 2y agosymengineFlint3 support and SBML printing fixes
- 3y agosymengineBuild fixes only, no functional change
- 3y agosymengineMatrix expressions, Intersection class and LLVM 16 support
- 4y agofossilsimBug fixes and documentation cleanup
- 4y agofossilsimTrait simulation arrives: Mk, BM and OU models ⚡
- 4y agosymengineAdds serialization and a first simplify() implementation
- 4y agosymengineFixes MSVC2017 compilation failure
- 5y agofossilsimOccurrence handling for the occurrence birth-death model
Frequently asked questions
What is the difference between fossilsim and symengine?
They serve adjacent needs but don't currently overlap on shipped themes. fossilsim and symengine are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is fossilsim better than symengine?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. fossilsim and symengine are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to fossilsim?
Top fossilsim alternatives in Analytics are ranked by recent ship velocity. Browse the "fossilsim alternatives" section above for the current picks, or visit /alternatives/fossilsim-r for the full list with editorial commentary on each.
What are the best alternatives to symengine?
Top symengine alternatives in Analytics are ranked by recent ship velocity. Browse the "symengine alternatives" section above for the current picks, or visit /alternatives/symengine-r for the full list with editorial commentary on each.