STACAS
Single-cell batch correction that learned to use cell labels, then spent three releases chasing Seurat.
Comparison · Analytics
cTMed vs reda
A side-by-side editorial comparison of cTMed and reda — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r-packagecran
cTMed vs reda: at a glance
What is cTMed?
Continuous-time mediation effects get standardized centrality, six years into steady patch work
cTMed computes direct, indirect and total effects for continuous-time mediation models, with delta-method, Monte Carlo and bootstrap variants of each. Development is a long run of patch releases from the jeksterslab account, roughly every two months, each adding a function or two. The latest adds standardized centrality measures and allows a diagonal sigma across ten standardized estimators.
What is reda?
A mature recurrent-event toolkit in careful maintenance, shedding weight rather than adding surface.
reda provides nonparametric mean cumulative function estimation, gamma-frailty rate regression, and event-data simulation for recurrent-event survival analysis. The core API settled at 0.5.0 when Recur() replaced Survr() and the MCF internals moved to C++. Everything since has been consolidation: small argument additions, method completions, and CRAN hygiene.
cTMed vs reda: editorial side-by-side
cTMed
2.5ANALYTICS
Continuous-time mediation effects get standardized centrality, six years into steady patch work
◆ Current state
cTMed computes direct, indirect and total effects for continuous-time mediation models, with delta-method, Monte Carlo and bootstrap variants of each. Development is a long run of patch releases from the jeksterslab account, roughly every two months, each adding a function or two. The latest adds standardized centrality measures and allows a diagonal sigma across ten standardized estimators.
◆ Where it's heading
The package is filling out a matrix rather than changing shape: for each effect type there is a delta-method, a Monte Carlo and a bootstrap path, and each release closes another cell. The 2025 releases were largely externally forced — an Armadillo 15.0.x transition at CRAN, a citation addition after the Psychological Methods paper landed — which suggests the statistical core has been settled since the 1.0.6 standardization revision.
◆ Prediction
The diagonal-sigma option has now reached the standardized estimators; extending it to the remaining unstandardized variants is the obvious next cell to fill.
reda
0.0ANALYTICS
A mature recurrent-event toolkit in careful maintenance, shedding weight rather than adding surface.
◆ Current state
reda provides nonparametric mean cumulative function estimation, gamma-frailty rate regression, and event-data simulation for recurrent-event survival analysis. The core API settled at 0.5.0 when Recur() replaced Survr() and the MCF internals moved to C++. Everything since has been consolidation: small argument additions, method completions, and CRAN hygiene.
◆ Where it's heading
The last three releases contain no new modelling capability at all — a dependency reshuffle, a test-example correction, and a print-order fix. The package is being kept installable and correct rather than extended. Its tightest coupling is to splines2, a sibling package from the same maintainer, which supplies the derivative machinery reda depends on.
◆ Prediction
Expect continued small-cadence CRAN-compliance releases tracking ggplot2 and splines2 changes. The entries show no in-progress feature work, so a substantive release would have to arrive without warning from this feed.
Alternatives to cTMed and reda
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either cTMed or reda.
ggtrace
A debugger for ggplot2's internals, hardening its grip as the internals it traces keep moving.
kde1d
A univariate density estimator that added zero-inflated data and reopened its C++ API to do it.
svines
Stationary vine copulas for time series, released in lockstep with the rest of Nagler's vine stack.
gghighlight
A single-purpose ggplot2 extension that has spent six years tracking ggplot2 instead of growing.
rtrek
A Star Trek data package that became a Memory Alpha web client and has been patching scrapers ever since.
Recent activity from cTMed and reda
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 27d agocTMedStandardized centrality measures and diagonal-sigma support
- 6mo agocTMedMinor method edits
- 10mo agocTMedPackage citation added for the Psychological Methods paper
- 10mo agocTMedArmadillo 15.0.x compatibility for CRAN
- 11mo agoredaggplot2 and grDevices demoted to Suggests
- 1y agoredaTest example and documentation typo fixes
- 1y agocTMedStandardization reworked around the steady-state covariance matrix
- 1y agocTMedBootstrap centrality estimators and MCPhiSigma()
- 4y agoredasimEvent() gains a user-supplied rate bound
- 5y agoredasummary() method completes the Recur object
- 5y agoredaDerivatives sourced from splines2's deriv method
- 6y agoredaMCF estimates can now skip variance computation
Frequently asked questions
What is the difference between cTMed and reda?
Both compete on the same themes — r-package, cran — within Analytics. cTMed is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is cTMed better than reda?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. cTMed is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to cTMed?
Top cTMed alternatives in Analytics are ranked by recent ship velocity. Browse the "cTMed alternatives" section above for the current picks, or visit /alternatives/ctmed for the full list with editorial commentary on each.
What are the best alternatives to reda?
Top reda alternatives in Analytics are ranked by recent ship velocity. Browse the "reda alternatives" section above for the current picks, or visit /alternatives/reda for the full list with editorial commentary on each.