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Comparison · Infra & APIs

checkmate vs onemap

A side-by-side editorial comparison of checkmate and onemap — release velocity, themes, recent moves, and the top alternatives to consider.

checkmate vs onemap: at a glance

Featurecheckmateonemap
SectorInfra & APIsInfra & APIs
Velocity score0.00.0
Sparks · 30d00
Top themesargument-validation, r-internals, reverse-dependencies, infrastructuregenetic-mapping, linkage-analysis, genotyping-by-sequencing, mappoly
Last editorial update2h ago58m ago
WebsiteVisit →Visit →

What is checkmate?

Infrastructure so widely depended on that its most consequential release changed nothing.

checkmate provides fast argument checks and is a dependency deep in the R package graph, which shapes everything about how it releases. The last five tags are small: a deprecated-internal-call cleanup, a complex-number edge case in allMissing(), a sprintf format fix. The most recent release removes calls to internal R functions that newer R versions no longer expose.

Read the full checkmate trajectory →

What is onemap?

A genetic-mapping mainstay that now points new users toward MAPpoly at load time

OneMap constructs genetic linkage maps for experimental crosses, and its 3.x line turned it into a hub in a wider mapping toolchain: export functions for VIEWpoly and QTLpoly, summary and interactive ordering functions adapted from MAPpoly, and retention of reference and alternative allele information from imported VCFs. The most recent release, 3.2.0 in January 2025, adds an announcement about MAPpoly to the README and the package load message, fixes a subscript-out-of-bounds warning in rf_2pts and refreshes vignettes and tests.

Read the full onemap trajectory →

checkmate vs onemap: editorial side-by-side

C
checkmate
INFRA · APIS
0.0

Infrastructure so widely depended on that its most consequential release changed nothing.

◆ Current state

checkmate provides fast argument checks and is a dependency deep in the R package graph, which shapes everything about how it releases. The last five tags are small: a deprecated-internal-call cleanup, a complex-number edge case in allMissing(), a sprintf format fix. The most recent release removes calls to internal R functions that newer R versions no longer expose.

◆ Where it's heading

The package is in the phase where its obligations outweigh its ambitions. When R-devel changed whether NULL counts as atomic, checkmate's published response was to keep the old behaviour specifically to avoid breaking reverse dependencies, which is the clearest statement of its position in the stack. New check functions still appear, but rarely, and the bulk of the work is tracking upstream R and its C API.

◆ Prediction

Expect continued adaptation to R internals as the C API narrows, and any behaviour change to arrive with an explicit reverse-dependency justification rather than as a default flip.

O
onemap
INFRA · APIS
0.0

A genetic-mapping mainstay that now points new users toward MAPpoly at load time

◆ Current state

OneMap constructs genetic linkage maps for experimental crosses, and its 3.x line turned it into a hub in a wider mapping toolchain: export functions for VIEWpoly and QTLpoly, summary and interactive ordering functions adapted from MAPpoly, and retention of reference and alternative allele information from imported VCFs. The most recent release, 3.2.0 in January 2025, adds an announcement about MAPpoly to the README and the package load message, fixes a subscript-out-of-bounds warning in rf_2pts and refreshes vignettes and tests.

◆ Where it's heading

Versions 3.0.0 and 3.1.0 were driven by a benchmarking preprint on genotyping-by-sequencing best practice, and their content follows directly: marker filtering from two-point estimates, memory reduction after filtering, and optimisation of find_bins and map_avoid_unlinked. What has happened since is signposting rather than capability — a package that spent two releases integrating with MAPpoly now tells users about it every time it loads. The pre-3.0 tags are backfilled, with versions 2.3 through 2.7 sharing a single August 2021 timestamp, so their order carries no information.

◆ Prediction

The load-message announcement suggests attention is flowing toward the MAPpoly side of the toolchain; expect maintenance and compatibility releases here rather than new mapping algorithms.

Alternatives to checkmate and onemap

Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either checkmate or onemap.

See all checkmate alternatives → · See all onemap alternatives →

Recent activity from checkmate and onemap

Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.

  1. 6mo agocheckmateRemoves deprecated internal R calls
  2. 0y agocheckmateComplex-number allMissing() fix; internal isFrame() call dropped
  3. 1y agoonemapMAPpoly announcement added to README and load message
  4. 2y agocheckmateLong-integer sprintf format string fixed
  5. 2y agocheckmateKeeps NULL atomic to avoid breaking reverse dependencies
  6. 3y agoonemapExports to VIEWpoly and QTLpoly; marker ordering and map summaries
  7. 3y agocheckmateAdds checkPermutation and better long-vector handling
  8. 3y agoonemapTwo-point marker filtering and memory reduction
  9. 4y agoonemapPSOCK and FORK parallelization choice; vcfR as an import
  10. 5y agoonemaphmm=FALSE option for ordering algorithms
  11. 5y agoonemapMDSMap dependency removed

Frequently asked questions

What is the difference between checkmate and onemap?

They serve adjacent needs but don't currently overlap on shipped themes. checkmate and onemap are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.

Is checkmate better than onemap?

Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. checkmate and onemap are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.

What are the best alternatives to checkmate?

Top checkmate alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "checkmate alternatives" section above for the current picks, or visit /alternatives/checkmate for the full list with editorial commentary on each.

What are the best alternatives to onemap?

Top onemap alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "onemap alternatives" section above for the current picks, or visit /alternatives/onemap for the full list with editorial commentary on each.