mlr3proba
mlr3proba is shedding weight as its survival work moves into sibling packages
Comparison · Analytics
bonsai vs workflows
A side-by-side editorial comparison of bonsai and workflows — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:tidymodels
bonsai vs workflows: at a glance
What is bonsai?
bonsai keeps widening tidymodels' boosted-tree engine bench, catboost most recently
bonsai exists to attach non-core tree engines to parsnip's boost_tree() and rand_forest(), and the release history reads as a steady accumulation of them: partykit, aorsf, lightgbm, and now catboost. The 0.4.x line is spent making catboost behave like a full tidymodels citizen rather than adding anything new.
What is workflows?
The tidymodels pipeline grew a third stage, and it happens after the model runs.
workflows bundles a preprocessor and a model into one object that tidymodels can fit, tune and extract from. Version 1.3.0 added a post stage backed by the tailor package, wired through every generic a workflow supports — augment, tidy, tunable, tune_args, required_pkgs and parameter extraction. Version 1.2.0 added sparse data support so fit() and predict() accept dgCMatrix and sparse tibbles. Earlier releases in view are boundary tightening: erroring on unknown model modes, on trained recipes, and on silently ignored formula offsets.
bonsai vs workflows: editorial side-by-side
bonsai
0.0ANALYTICS
bonsai keeps widening tidymodels' boosted-tree engine bench, catboost most recently
◆ Current state
bonsai exists to attach non-core tree engines to parsnip's boost_tree() and rand_forest(), and the release history reads as a steady accumulation of them: partykit, aorsf, lightgbm, and now catboost. The 0.4.x line is spent making catboost behave like a full tidymodels citizen rather than adding anything new.
◆ Where it's heading
Each engine follows the same arc — land it, then close the gaps that keep it from tuning cleanly (parameter naming, multi_predict, threading, case weights). Recent work is squarely in that second phase for catboost, with dials supplying the matching parameter objects on its own release schedule. Bug-fix density is high relative to new surface.
◆ Prediction
Expect the catboost integration to keep filling in tuning and GPU-related arguments before any further engine is added; the entries give no signal about which engine would come next.
workflows
0.0ANALYTICS
The tidymodels pipeline grew a third stage, and it happens after the model runs.
◆ Current state
workflows bundles a preprocessor and a model into one object that tidymodels can fit, tune and extract from. Version 1.3.0 added a post stage backed by the tailor package, wired through every generic a workflow supports — augment, tidy, tunable, tune_args, required_pkgs and parameter extraction. Version 1.2.0 added sparse data support so fit() and predict() accept dgCMatrix and sparse tibbles. Earlier releases in view are boundary tightening: erroring on unknown model modes, on trained recipes, and on silently ignored formula offsets.
◆ Where it's heading
The object is filling out into a complete pipeline description rather than a preprocessing-plus-model pair. Postprocessing is the structural addition — calibration and threshold selection were previously done by hand after prediction, outside anything tidymodels could tune or record — and the fact that it arrived integrated with tunable() and tune_args() rather than as a standalone step is the point. The rest of the arc is the steady tidymodels habit of converting silent guesses into errors.
◆ Prediction
Expect tailor postprocessors to spread through tune and workflowsets next, since the parameter and tuning generics were wired up first, and expect sparse support to extend to more engines after lightgbm.
Alternatives to bonsai and workflows
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either bonsai or workflows.
mlr3viz
mlr3viz keeps the ecosystem's plots working while the plots themselves move out
mlr3tuning
mlr3tuning is rebuilding its async machinery under a stable public surface
timetk
timetk swallowed anomalize whole, then went quiet for two years
modelbased
modelbased is turning marginal effects into a full contrast grammar
parameters
easystats' parameters package absorbs one more model class every few weeks
See all bonsai alternatives → · See all workflows alternatives →
Recent activity from bonsai and workflows
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 2mo agobonsaicatboost gains multi_predict() and corrected tuning parameters
- 11mo agoworkflowsWorkflows gain a postprocessing stage via tailor ⚡
- 1y agobonsaicatboost engine added to boost_tree()
- 1y agoworkflowsSparse matrices work through fit() and predict()
- 1y agobonsailightgbm accepts sparse matrices for fit and predict
- 2y agobonsaiaorsf fit failure in multisession workers fixed
- 2y agobonsaiaorsf engine added; lightgbm gains dataset params and case weights
- 2y agoworkflowsaugment() aligns with parsnip; censored regression supported
- 3y agoworkflowsRegister tuning generics unconditionally
- 3y agobonsailightgbm num_leaves becomes tunable; alias arguments disallowed
- 3y agoworkflowsMissing parsnip extensions now error early; unsupervised specs supported
- 3y agoworkflowsMode guessing removed; silent offset handling now errors
Frequently asked questions
What is the difference between bonsai and workflows?
Both compete on the same themes — tidymodels — within Analytics. bonsai and workflows are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is bonsai better than workflows?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. bonsai and workflows are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to bonsai?
Top bonsai alternatives in Analytics are ranked by recent ship velocity. Browse the "bonsai alternatives" section above for the current picks, or visit /alternatives/bonsai-r for the full list with editorial commentary on each.
What are the best alternatives to workflows?
Top workflows alternatives in Analytics are ranked by recent ship velocity. Browse the "workflows alternatives" section above for the current picks, or visit /alternatives/workflows-r for the full list with editorial commentary on each.