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Comparison · Analytics
biocro vs spatstat.geom
A side-by-side editorial comparison of biocro and spatstat.geom — release velocity, themes, recent moves, and the top alternatives to consider.
biocro vs spatstat.geom: at a glance
What is biocro?
BioCro swapped an unstable iteration for real root finders, changing what its crop models compute.
BioCro is a C++ crop growth simulator with an R interface, built from swappable modules for photosynthesis, respiration and development. Version 3.3.0 added multidimensional and one-dimensional root finders to the C++ source and put them to work immediately, replacing the fixed-point iteration used for intercellular CO2 with a Dekker root finder on the grounds that fixed-point iteration is known to be unstable there. Getting to that release also required moving from C++11 to C++17 and updating the bundled boost from 1.71 to 1.89.
What is spatstat.geom?
The geometry layer under spatstat, steadily absorbing 3D patterns and missing-data semantics
spatstat.geom holds the spatial data structures and geometric operations the rest of the spatstat family builds on — windows, tessellations, images, point patterns and the operations that move between them. Recent releases split their attention between extending those structures to three dimensions and hardening the discretisation code where polygonal geometry meets a pixel grid. 3.8-2 adds more capabilities for three-dimensional point patterns.
biocro vs spatstat.geom: editorial side-by-side
biocro
0.0ANALYTICS
BioCro swapped an unstable iteration for real root finders, changing what its crop models compute.
◆ Current state
BioCro is a C++ crop growth simulator with an R interface, built from swappable modules for photosynthesis, respiration and development. Version 3.3.0 added multidimensional and one-dimensional root finders to the C++ source and put them to work immediately, replacing the fixed-point iteration used for intercellular CO2 with a Dekker root finder on the grounds that fixed-point iteration is known to be unstable there. Getting to that release also required moving from C++11 to C++17 and updating the bundled boost from 1.71 to 1.89.
◆ Where it's heading
Two threads run together: the biology is being broken into finer interchangeable modules — separate maintenance respiration, alternative linear and logistic SLA methods, a direct development-index module — while the numerics underneath are being made solvable in general. The root finders are explicitly staged to move into the shared biocro/framework repository, so this is groundwork for other models rather than for this package alone.
◆ Prediction
More module-level alternatives that depend on simultaneous-equation solutions are the natural follow-on, and the root finders should migrate out to biocro/framework as the notes state.
spatstat.geom
2.5ANALYTICS
The geometry layer under spatstat, steadily absorbing 3D patterns and missing-data semantics
◆ Current state
spatstat.geom holds the spatial data structures and geometric operations the rest of the spatstat family builds on — windows, tessellations, images, point patterns and the operations that move between them. Recent releases split their attention between extending those structures to three dimensions and hardening the discretisation code where polygonal geometry meets a pixel grid. 3.8-2 adds more capabilities for three-dimensional point patterns.
◆ Where it's heading
Two threads run through this window. The first is a family-wide push into 3D that originated in the simulation package and has now reached the geometry layer. The second is a slower semantic change: 3.5-0 introduced missing or unavailable (NA) spatial objects, and 3.6-0 followed with more facilities for handling them, meaning an absent window or image became a representable value rather than an error. Around both, the plotting and discretisation code accretes steadily — nonlinear colour maps, plot backgrounds, transparency control, signed distance transforms, and repeated attention to boundary pixels.
◆ Prediction
Expect the 3D surface here to keep filling in behind the simulation package rather than leading it, given that 3.8-2 follows the 3D simulation release by two months. The entries give no indication that the NA work is finished, since it has already spanned two releases.
Alternatives to biocro and spatstat.geom
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either biocro or spatstat.geom.
epikit
epikit narrows to field-epidemiology helpers, handing proportions to a sibling package
SimInf
SimInf 10.0 turns an epidemic simulator into a tool that fits models to real time series
mutagen
A young package porting Stata's egen row-wise helpers to the tidyverse, one function per release
broman
A statistician's personal toolbox, growing one plotting utility at a time
qtl
R/qtl is in pure custodial mode: every recent release answers a compiler, not a user
See all biocro alternatives → · See all spatstat.geom alternatives →
Recent activity from biocro and spatstat.geom
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 20d agospatstat.geomMore three-dimensional point pattern capabilities
- 2mo agospatstat.geomBetter boundary pixel handling when discretising windows
- 6mo agobiocroCompiler warning blocking Linux builds fixed
- 6mo agospatstat.geomAnalytic level sets and signed distance transforms
- 8mo agobiocroC++ root finders added; Ci calculation moved off fixed-point iteration ⚡
- 10mo agospatstat.geomNA object handling extended; clickpoly gains grid snapping
- 1y agospatstat.geomNA spatial objects, hole removal and connected components
- 1y agospatstat.geomNonlinear colour and symbol maps; half-open quadrat tiles
- 1y agobiocroMaintenance respiration module; SLA split into swappable methods
- 2y agobiocroFirst CRAN-accepted release after a 20 MB to 5 MB cut
- 2y agobiocroDESCRIPTION date refreshed for CRAN submission
- 2y agobiocroCI workflow debugging tag, not a release
Frequently asked questions
What is the difference between biocro and spatstat.geom?
They serve adjacent needs but don't currently overlap on shipped themes. spatstat.geom is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is biocro better than spatstat.geom?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. spatstat.geom is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to biocro?
Top biocro alternatives in Analytics are ranked by recent ship velocity. Browse the "biocro alternatives" section above for the current picks, or visit /alternatives/biocro-r for the full list with editorial commentary on each.
What are the best alternatives to spatstat.geom?
Top spatstat.geom alternatives in Analytics are ranked by recent ship velocity. Browse the "spatstat.geom alternatives" section above for the current picks, or visit /alternatives/spatstat-geom for the full list with editorial commentary on each.