rollupTree
The recursive-computation engine under massProps grows the accessors its consumer needed
Comparison · Infra & APIs
bcdata vs PEIMAN2
A side-by-side editorial comparison of bcdata and PEIMAN2 — release velocity, themes, recent moves, and the top alternatives to consider.
bcdata vs PEIMAN2: at a glance
What is bcdata?
The R gateway to B.C.'s data catalogue, mostly busy keeping pace with the servers behind it.
bcdata searches the British Columbia Data Catalogue and pulls records from it, including spatial layers retrieved through WMS and WFS with dplyr-style filtering translated into CQL queries sent to the server. The recent releases are small and corrective: 0.5.3 fixes malformed CQL generated by geometry predicates such as INTERSECTS, which the server had been rejecting outright, and 0.5.2 drops a leaflet extension dependency in favour of a base leaflet call. Cadence is a few releases a year.
What is PEIMAN2?
PEIMAN2 cut its annotation database loose from its release cycle without breaking CRAN.
PEIMAN2 does enrichment analysis over post-translational modifications, testing whether a protein list is enriched for particular PTMs against UniProt-derived annotations, with translation functions bridging to mass spectrometry workflows. Its answers are only as current as its bundled database, and until June that database could only be refreshed by releasing a new package version. Version 1.1.0 changes that.
bcdata vs PEIMAN2: editorial side-by-side
bcdata
0.0INFRA · APIS
The R gateway to B.C.'s data catalogue, mostly busy keeping pace with the servers behind it.
◆ Current state
bcdata searches the British Columbia Data Catalogue and pulls records from it, including spatial layers retrieved through WMS and WFS with dplyr-style filtering translated into CQL queries sent to the server. The recent releases are small and corrective: 0.5.3 fixes malformed CQL generated by geometry predicates such as INTERSECTS, which the server had been rejecting outright, and 0.5.2 drops a leaflet extension dependency in favour of a base leaflet call. Cadence is a few releases a year.
◆ Where it's heading
Almost everything in this window is a response to something changing on the other side of the connection: a CKAN 2.9 upgrade that stopped search and listing functions returning complete results, WMS and WFS capability requests that cannot be relied on, dbplyr tightening the rules for local evaluation, and general catalogue-side churn. The package's own interface has been stable since the 0.4.0 change that required local() around locally-evaluated filter calls, and the work since has gone into keeping that stable interface working rather than extending it.
◆ Prediction
Expect the same pattern: targeted fixes as the catalogue and its CKAN, WMS and WFS layers change, with occasional dependency pruning of the kind 0.5.2 did. Nothing in these entries points toward a 0.6 or a change in what the package covers.
PEIMAN2
0.0INFRA · APIS
PEIMAN2 cut its annotation database loose from its release cycle without breaking CRAN.
◆ Current state
PEIMAN2 does enrichment analysis over post-translational modifications, testing whether a protein list is enriched for particular PTMs against UniProt-derived annotations, with translation functions bridging to mass spectrometry workflows. Its answers are only as current as its bundled database, and until June that database could only be refreshed by releasing a new package version. Version 1.1.0 changes that.
◆ Where it's heading
The package has been moving from a fixed snapshot toward versioned, user-selectable data. Earlier releases updated the bundled database in place — 1.0.0 shipped the March 2025 version and said little else — which meant the annotation vintage was whatever the package version implied. Now update_peiman_database() downloads and caches external database files and UniProt PTM lists, enrichment workflows take a database_version argument, and the mass-spec translators take a ptmlist_version, so an analysis can pin a dated database rather than a package release. The CRAN-safe default is preserved deliberately: loading, examples and checks still use the bundled internal data and need no network.
◆ Prediction
Version pinning is now expressible but the release notes do not describe how a chosen version is recorded in output, so surfacing the active database version in results is the natural companion. The database and the UniProt PTM list are versioned separately, which leaves room for a combined manifest.
Alternatives to bcdata and PEIMAN2
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either bcdata or PEIMAN2.
massProps
A mass-properties rollup spends a year on documentation and follows its sibling's API
writeAlizer
Six months of releases and not one of them touched the scoring models
samplr
A cognitive-science sampling package ships once, then goes quiet for eighteen months
stochvol
A Bayesian volatility sampler in its maintenance decade, paying for its own speed
midr
A black-box interpreter reaches CRAN, then learns multi-class and survival responses
See all bcdata alternatives → · See all PEIMAN2 alternatives →
Recent activity from bcdata and PEIMAN2
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1mo agobcdataGeometry predicate filters no longer rejected by the server
- 2mo agoPEIMAN2Database updates decouple from package releases ⚡
- 6mo agobcdataleaflet.extras dependency dropped for WMS legends
- 1y agoPEIMAN2Bundled database refreshed to the March 2025 UniProt vintage
- 1y agoPEIMAN2Documentation fix for the second example dataset
- 1y agobcdataSearch and listing functions return complete results again
- 1y agobcdataHardened against failing WMS and WFS capability requests
- 2y agoPEIMAN2Background lists for SEA and PSEA; tidyverse dependency dropped
- 3y agobcdataJSON resources readable; organization listing helpers added
- 3y agobcdatafilter() now requires local() for locally-evaluated calls
Frequently asked questions
What is the difference between bcdata and PEIMAN2?
They serve adjacent needs but don't currently overlap on shipped themes. bcdata and PEIMAN2 are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is bcdata better than PEIMAN2?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. bcdata and PEIMAN2 are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to bcdata?
Top bcdata alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "bcdata alternatives" section above for the current picks, or visit /alternatives/bcdata for the full list with editorial commentary on each.
What are the best alternatives to PEIMAN2?
Top PEIMAN2 alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "PEIMAN2 alternatives" section above for the current picks, or visit /alternatives/peiman2 for the full list with editorial commentary on each.