collinear
collinear has broken its API twice to stop making the user pick thresholds.
Comparison · Analytics
b3gbi vs soilDBdata
A side-by-side editorial comparison of b3gbi and soilDBdata — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r package
b3gbi vs soilDBdata: at a glance
What is b3gbi?
b3gbi pulled confidence intervals out of its indicator workflow and handed them to dubicube.
b3gbi computes biodiversity indicators from GBIF occurrence cubes for the B-Cubed project, and sits at 0.9.4 in a JOSS review run-up. The 0.9 release decoupled uncertainty from indicator calculation: confidence intervals are no longer produced inline but added afterward with add_ci(), backed by whole-cube bootstrapping from the sibling dubicube package. Everything since has been grid-parsing and compatibility repair around that split.
What is soilDBdata?
soilDBdata exists so soilDB's tests can run without a NASIS connection.
soilDBdata is a data-only package supplying NASIS and gSSURGO sample datasets as .sqlite assets, installed separately by soilDB's GitHub Actions so unit tests that would otherwise need database access can run. It began as a proof of concept carrying MT663 pedon and component tables used in soil survey coursework, and its most recent release adds a Marshall Islands FY26 gSSURGO dataset. Releases are infrequent and driven by what the parent package needs to test.
b3gbi vs soilDBdata: editorial side-by-side
b3gbi
2.5ANALYTICS
b3gbi pulled confidence intervals out of its indicator workflow and handed them to dubicube.
◆ Current state
b3gbi computes biodiversity indicators from GBIF occurrence cubes for the B-Cubed project, and sits at 0.9.4 in a JOSS review run-up. The 0.9 release decoupled uncertainty from indicator calculation: confidence intervals are no longer produced inline but added afterward with add_ci(), backed by whole-cube bootstrapping from the sibling dubicube package. Everything since has been grid-parsing and compatibility repair around that split.
◆ Where it's heading
Two forces are shaping releases. Internally, the uncertainty split produced an indicator-specific rule book — species-level indicators bootstrap the whole cube, raw counts resample within year, evenness gets a logit transform — and that rule book is where the statistical thinking now lives. Externally, GBIF's taxonomic backbone migration to the Catalogue of Life forced string taxon keys through process_cube() and the plotting paths, while recurring EEA and MGRS grid-code fixes mark coordinate parsing as the least settled area.
◆ Prediction
The 0.9.4 notes are entirely JOSS review items — contributors, examples, tracked datasets — so the next release is most likely a JOSS-accepted 1.0 rather than new indicator work.
soilDBdata
0.0ANALYTICS
soilDBdata exists so soilDB's tests can run without a NASIS connection.
◆ Current state
soilDBdata is a data-only package supplying NASIS and gSSURGO sample datasets as .sqlite assets, installed separately by soilDB's GitHub Actions so unit tests that would otherwise need database access can run. It began as a proof of concept carrying MT663 pedon and component tables used in soil survey coursework, and its most recent release adds a Marshall Islands FY26 gSSURGO dataset. Releases are infrequent and driven by what the parent package needs to test.
◆ Where it's heading
Development follows soilDB rather than leading it: assets get bumped when a soilDB version changes, and purpose lists are updated when soilDB adds a table. The one release that changed what testing is possible was v0.1.1, which added selected-set _View_1 tables alongside whole tables so both SS=TRUE and SS=FALSE code paths could be exercised. Four-year gaps between releases are normal here and do not indicate abandonment — a fixture package only needs to move when the fixtures go stale.
◆ Prediction
The recent addition is a new geography rather than a new table structure, so further releases most likely continue broadening dataset coverage as soilDB gains regions to test against.
Alternatives to b3gbi and soilDBdata
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either b3gbi or soilDBdata.
nert
nert put fourteen TERN datasets behind one dispatcher and called it stable.
scTypeEval
scTypeEval judges single-cell annotations without needing a ground truth to judge them against.
medrobust
medrobust made its partial-identification bounds usable by giving them confidence intervals.
probmed
probmed went from one probabilistic effect size to a family of them in sixteen days.
fluxnet-package
fluxnet keeps swapping its own plumbing — first a Python downloader, now a DuckDB backend.
See all b3gbi alternatives → · See all soilDBdata alternatives →
Recent activity from b3gbi and soilDBdata
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 4d agob3gbiJOSS review fixes: contributors, examples, tracked data
- 1mo agob3gbiEEA grid coordinates no longer scaled by resolution
- 1mo agob3gbiadd_ci() no longer crashes on completeness indicators
- 1mo agob3gbiString taxon keys for GBIF's Catalogue of Life backbone
- 1mo agob3gbiUncertainty split out of the indicator workflow into add_ci() ⚡
- 1mo agob3gbiFAIR column mapping doc and Zenodo DOI badge
- 3mo agosoilDBdataMarshall Islands FY26 gSSURGO dataset added
- 1y agosoilDBdataMT663 fixtures refreshed for soilDB 2.8.3
- 1y agosoilDBdataNASIS purpose lists updated for siteothvegclass
- 4y agosoilDBdataSelected-set _View_1 tables enable SS=TRUE/FALSE testing
- 4y agosoilDBdataProof of concept: MT663 pedon and component .sqlite fixtures
Frequently asked questions
What is the difference between b3gbi and soilDBdata?
Both compete on the same themes — r package — within Analytics. b3gbi is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is b3gbi better than soilDBdata?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. b3gbi is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to b3gbi?
Top b3gbi alternatives in Analytics are ranked by recent ship velocity. Browse the "b3gbi alternatives" section above for the current picks, or visit /alternatives/b3gbi for the full list with editorial commentary on each.
What are the best alternatives to soilDBdata?
Top soilDBdata alternatives in Analytics are ranked by recent ship velocity. Browse the "soilDBdata alternatives" section above for the current picks, or visit /alternatives/soildbdata for the full list with editorial commentary on each.