pr2database
The protist reference database keeps widening past the rRNA gene it was built on.
Comparison · Infra & APIs
states vs valr
A side-by-side editorial comparison of states and valr — release velocity, themes, recent moves, and the top alternatives to consider.
states vs valr: at a glance
What is states?
State-panel tooling holding steady since its 2020 data and ergonomics release.
states supplies the Gleditsch & Ward and Correlates of War state lists and the tooling to turn them into country-year or country-month panels, with plot_missing() for coverage checks. The substantive work landed in 2020; the releases since are compatibility fixes against ggplot2, dplyr, readr and testthat. The most recent entry is a single test repair.
What is valr?
valr's interval verbs now read genomic files in place instead of demanding a loaded tibble.
valr reimplements bedtools-style genome interval arithmetic as tidyverse verbs backed by C++. Its long project has been closing the behavioural gap with bedtools — the book-ended interval semantics finally match in 0.10.0, three releases after the deprecation began. The July release also ends the assumption that intervals must be in memory: bed_map(), bed_intersect(), bed_subtract(), bed_coverage() and bed_window() accept a bigWig or bigBed path or URL where an interval table used to go.
states vs valr: editorial side-by-side
states
0.0INFRA · APIS
State-panel tooling holding steady since its 2020 data and ergonomics release.
◆ Current state
states supplies the Gleditsch & Ward and Correlates of War state lists and the tooling to turn them into country-year or country-month panels, with plot_missing() for coverage checks. The substantive work landed in 2020; the releases since are compatibility fixes against ggplot2, dplyr, readr and testthat. The most recent entry is a single test repair.
◆ Where it's heading
The package has reached the point where its own data and API are settled and the release trigger is upstream churn in the tidyverse. What movement there is goes toward making the two state lists interchangeable, with the microstates coding carried from G&W onto the COW data as the clearest example, rather than toward new datasets.
◆ Prediction
The next release is most likely another compatibility pass; a data refresh would be the signal that the package is active again.
valr
0.0INFRA · APIS
valr's interval verbs now read genomic files in place instead of demanding a loaded tibble.
◆ Current state
valr reimplements bedtools-style genome interval arithmetic as tidyverse verbs backed by C++. Its long project has been closing the behavioural gap with bedtools — the book-ended interval semantics finally match in 0.10.0, three releases after the deprecation began. The July release also ends the assumption that intervals must be in memory: bed_map(), bed_intersect(), bed_subtract(), bed_coverage() and bed_window() accept a bigWig or bigBed path or URL where an interval table used to go.
◆ Where it's heading
Two arcs converge here. One is compatibility: min_overlap arrived with a deprecation warning in 0.9.0 and its default flipped from 0 to 1 in 0.10.0, so book-ended intervals are excluded by default as bedtools does, with the internal calculations in bed_closest() and friends deliberately left counting them. The other is the file-backed path, which grew out of the cpp11bigwig dependency adopted in 0.8.3 for read_bigwig() and re-exported in 0.9.0 — reading a file became querying one. Underneath, the C++ base keeps getting lighter: Rcpp swapped for cpp11, rlang cut to a single function, per-group memory copies removed from three verbs.
◆ Prediction
Only five verbs take a file argument today and bed_closest(), bed_glyph() and the statistical verbs do not, so extending the file-backed path across the rest of the API is the obvious follow-up. The deprecated tibble re-exports and the now-defunct n_fields argument suggest continued removal of the compatibility layer in the next minor release.
Alternatives to states and valr
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either states or valr.
ggalign
Composable aligned layouts, rebuilt on S7 while ggplot2 4.0 lands underneath.
prioritizr
Conservation planning absorbs the literature's target-setting rules as code.
jSDM
Joint species distribution models in Gibbs-sampled C++, quiet since 2023.
rsofun
An ecosystem model starts tracking carbon isotopes and land-use change.
usmap
Ten years in, US mapping splits its data out and finally adds Puerto Rico.
Recent activity from states and valr
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1mo agovalrInterval verbs read bigWig and bigBed files directly ⚡
- 7mo agovalrbed_slop() and bed_flank() preserve input row order
- 8mo agovalrmin_overlap introduced; C++ backend moves from Rcpp to cpp11
- 0y agostatesplot_missing() test fixed for the next ggplot2
- 1y agovalrTest updated for ggplot2 3.6.0
- 1y agovalrread_bigwig() switches to cpp11bigwig; read_gtf() deprecated
- 1y agovalrCRAN Rd link NOTE and maintainer email change
- 2y agostatesggplot2 and dplyr deprecation cleanup
- 2y agostatesBundled state data stripped to plain data frames
- 5y agostatesMicrostate coding for COW data and state_panel() shortcuts
- 7y agostatesSimpler defaults for state_panel() and plot_missing()
Frequently asked questions
What is the difference between states and valr?
They serve adjacent needs but don't currently overlap on shipped themes. states and valr are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is states better than valr?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. states and valr are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to states?
Top states alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "states alternatives" section above for the current picks, or visit /alternatives/states for the full list with editorial commentary on each.
What are the best alternatives to valr?
Top valr alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "valr alternatives" section above for the current picks, or visit /alternatives/valr for the full list with editorial commentary on each.