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Comparison · Analytics
spatstat vs vegan
A side-by-side editorial comparison of spatstat and vegan — release velocity, themes, recent moves, and the top alternatives to consider.
spatstat vs vegan: at a glance
What is spatstat?
The spatstat umbrella package, now mostly a pointer to the sub-packages doing the work
spatstat is the front package of a family that was split into specialised components — spatstat.geom, spatstat.random, spatstat.model, spatstat.explore, spatstat.univar and spatstat.sparse. Its own release notes reflect that: entries in this window are largely announcements of where the real changes landed, plus documentation and cross-reference maintenance. The codebase it fronts passed 200,000 lines as of 3.5-1.
What is vegan?
Community ecology's standard toolkit is retiring the functions a generation of scripts was built on.
vegan is the reference R package for ordination and diversity analysis in community ecology. The 2.7 line redesigned constrained ordination graphics from scratch, made adonis defunct in favor of adonis2, and moved permutation tests for partial RDA and db-RDA onto residualized predictors. The current 2.7-5 release is stabilization — parallel processing on Windows, ggvegan compatibility for tidy scores, and arrow label placement.
spatstat vs vegan: editorial side-by-side
spatstat
0.0ANALYTICS
The spatstat umbrella package, now mostly a pointer to the sub-packages doing the work
◆ Current state
spatstat is the front package of a family that was split into specialised components — spatstat.geom, spatstat.random, spatstat.model, spatstat.explore, spatstat.univar and spatstat.sparse. Its own release notes reflect that: entries in this window are largely announcements of where the real changes landed, plus documentation and cross-reference maintenance. The codebase it fronts passed 200,000 lines as of 3.5-1.
◆ Where it's heading
The split is effectively complete and the umbrella's role has settled into coordination — tracking version dependencies across sub-packages and pointing users to them. The family has kept subdividing over this period, with spatstat.univar joining in 3.1-0. The one substantive user-facing addition here is documentation infrastructure: 3.3-0 added the ability to list the history of changes to a specific function, which is a navigational answer to a codebase now spread across many packages.
◆ Prediction
Expect this package's notes to continue summarising sub-package activity rather than carrying features of its own, since every release in this window does exactly that. Read spatstat.geom, spatstat.random and spatstat.model for the substance.
vegan
0.0ANALYTICS
Community ecology's standard toolkit is retiring the functions a generation of scripts was built on.
◆ Current state
vegan is the reference R package for ordination and diversity analysis in community ecology. The 2.7 line redesigned constrained ordination graphics from scratch, made adonis defunct in favor of adonis2, and moved permutation tests for partial RDA and db-RDA onto residualized predictors. The current 2.7-5 release is stabilization — parallel processing on Windows, ggvegan compatibility for tidy scores, and arrow label placement.
◆ Where it's heading
Two long deprecation programs are converging. Plotting is being pushed out of the package: lattice functions are deprecated in favor of ggplot2 equivalents now living in ggvegan, a separate CRAN package, while vegan's own base graphics were rebuilt around independently configurable score types and pipe-based construction. Meanwhile the statistical core is being made internally consistent — add1 and drop1 no longer use different internal models, and summary is no longer an accepted route to ordination scores.
◆ Prediction
Expect the remaining lattice functions to go defunct and more plotting responsibility to shift to ggvegan, leaving vegan as the statistical engine with a thin base graphics layer.
Alternatives to spatstat and vegan
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either spatstat or vegan.
cheapr
cheapr turned multi-threaded, and its next stop is a C++20 public API.
RadialMR
RadialMR's 2026 release corrects degrees of freedom that had been wrong since documentation.
mrbayes
mrbayes spent 2026 auditing its own Bayesian MR estimators for coding errors.
lineup2
lineup2 ships once every few years, and 2026's release is a logo and a core-count tweak.
stringi
stringi has spent two years on build hardening since its Unicode 15.1 reset.
See all spatstat alternatives → · See all vegan alternatives →
Recent activity from spatstat and vegan
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 2mo agospatstatSub-package updates across sparse, univar and random
- 2mo agoveganParallel processing stabilized, especially on Windows
- 5mo agoveganLattice plotting deprecated as ggvegan reaches CRAN
- 6mo agospatstatspatstat passes 200,000 lines of code
- 10mo agoveganPartial RDA permutation tests adopt residualized predictors
- 10mo agospatstatNew vignette documenting NA spatial objects
- 1y agoveganOrdination graphics rebuilt and adonis made defunct ⚡
- 1y agoveganRelease chasing undefined behavior in a C function
- 1y agospatstatPer-function change history now listable
- 1y agoveganpca, ca and pco added for unconstrained ordination
- 2y agospatstatspatstat.univar joins the package family
- 3y agospatstatSub-package cross-references and docs corrected
Frequently asked questions
What is the difference between spatstat and vegan?
They serve adjacent needs but don't currently overlap on shipped themes. spatstat and vegan are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is spatstat better than vegan?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. spatstat and vegan are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to spatstat?
Top spatstat alternatives in Analytics are ranked by recent ship velocity. Browse the "spatstat alternatives" section above for the current picks, or visit /alternatives/spatstat-r for the full list with editorial commentary on each.
What are the best alternatives to vegan?
Top vegan alternatives in Analytics are ranked by recent ship velocity. Browse the "vegan alternatives" section above for the current picks, or visit /alternatives/vegan-r for the full list with editorial commentary on each.