goat
A gene-set enrichment package that outgrew its human-only origins, then went quiet.
Comparison · Infra & APIs
samplr vs slendr
A side-by-side editorial comparison of samplr and slendr — release velocity, themes, recent moves, and the top alternatives to consider.
samplr vs slendr: at a glance
What is samplr?
A cognitive-science sampling package ships once, then goes quiet for eighteen months
samplr compares human performance against sampling algorithms, giving cognitive scientists the MCMC machinery to test whether people behave like samplers. Its entire public history is three releases: a 1.0.0 in August 2024, a floating-point fix eighteen seconds later, and then nothing until a February 2026 patch. The release notes are unusually thin even by CRAN standards.
What is slendr?
Population-genetic simulation in R, opened up to selection and finally easier to install.
slendr specifies spatial and non-spatial population-genetic models in R and simulates them through SLiM or msprime, returning tree sequences that tskit then analyses. Two threads dominate the current releases: keeping in step with fast-moving backends, with SLiM 5.1, pyslim 1.1.0 and Python 3.13 now required, and reducing the setup burden that its Python dependency imposes. Version 1.5.0 adds ephemeral uv-based virtual environments, so init_env(uv = TRUE) can stand in for creating a permanent environment with setup_env().
samplr vs slendr: editorial side-by-side
samplr
0.0INFRA · APIS
A cognitive-science sampling package ships once, then goes quiet for eighteen months
◆ Current state
samplr compares human performance against sampling algorithms, giving cognitive scientists the MCMC machinery to test whether people behave like samplers. Its entire public history is three releases: a 1.0.0 in August 2024, a floating-point fix eighteen seconds later, and then nothing until a February 2026 patch. The release notes are unusually thin even by CRAN standards.
◆ Where it's heading
The feed shows a package that shipped and stopped. The 2024 tags were both created in one sitting and say almost nothing; the 2026 release is a row-count bug in Mean_Variance() bundled with citation metadata, a dropped dependency and http-to-https link fixes — the housekeeping profile of a package being kept alive for the paper that cites it rather than actively developed.
◆ Prediction
Adding citation information to the README is usually the move of a maintainer expecting the package to be referenced rather than extended. On this cadence the next release is more likely another CRAN-hygiene patch than new algorithms; there is not enough in these notes to say otherwise.
slendr
0.0INFRA · APIS
Population-genetic simulation in R, opened up to selection and finally easier to install.
◆ Current state
slendr specifies spatial and non-spatial population-genetic models in R and simulates them through SLiM or msprime, returning tree sequences that tskit then analyses. Two threads dominate the current releases: keeping in step with fast-moving backends, with SLiM 5.1, pyslim 1.1.0 and Python 3.13 now required, and reducing the setup burden that its Python dependency imposes. Version 1.5.0 adds ephemeral uv-based virtual environments, so init_env(uv = TRUE) can stand in for creating a permanent environment with setup_env().
◆ Where it's heading
Since the 1.0.0 release added non-neutral simulation, the work has shifted from capability to friction. A large share of recent notes concerns Python environment handling, conda activation races on Windows, dependency pruning that made shiny optional, and argument names that misled users, as when gene_flow()'s rate argument turned out to mean total ancestry proportion rather than a rate. That is the profile of a package whose scientific surface is settled and whose remaining problems are the ones users actually hit.
◆ Prediction
Expect the uv-based environment path to move from fallback to default once it has proven itself, given the notes already describe an environment variable for making it so. The deprecated rate argument in gene_flow() is explicitly slated for removal in a future major release, which is the clearest signal here of what a 2.0 would contain.
Alternatives to samplr and slendr
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either samplr or slendr.
rollupTree
The recursive-computation engine under massProps grows the accessors its consumer needed
massProps
A mass-properties rollup spends a year on documentation and follows its sibling's API
writeAlizer
Six months of releases and not one of them touched the scoring models
stochvol
A Bayesian volatility sampler in its maintenance decade, paying for its own speed
midr
A black-box interpreter reaches CRAN, then learns multi-class and survival responses
See all samplr alternatives → · See all slendr alternatives →
Recent activity from samplr and slendr
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1mo agoslendrEphemeral uv Python environments remove the setup step
- 5mo agosamplrMean_Variance() row count corrected after eighteen months
- 7mo agoslendrgene_flow() separates migration rate from ancestry proportion
- 9mo agoslendrshiny made optional; SLiM 5.1 and Python 3.13 required
- 1y agoslendrconda activation reverted to a slower but reliable path
- 1y agoslendrBackends raised to SLiM 5.0, tskit 0.6.4 and msprime 1.3.4
- 1y agoslendrNon-neutral models arrive; slim() interface simplified ⚡
- 1y agosamplrFloating point comparison fix
- 1y agosamplrsamplr 1.0.0
Frequently asked questions
What is the difference between samplr and slendr?
They serve adjacent needs but don't currently overlap on shipped themes. samplr and slendr are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is samplr better than slendr?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. samplr and slendr are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to samplr?
Top samplr alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "samplr alternatives" section above for the current picks, or visit /alternatives/samplr for the full list with editorial commentary on each.
What are the best alternatives to slendr?
Top slendr alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "slendr alternatives" section above for the current picks, or visit /alternatives/slendr for the full list with editorial commentary on each.