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Comparison · Infra & APIs

rdocdump vs rgm

A side-by-side editorial comparison of rdocdump and rgm — release velocity, themes, recent moves, and the top alternatives to consider.

rdocdump vs rgm: at a glance

Featurerdocdumprgm
SectorInfra & APIsInfra & APIs
Velocity score0.00.0
Sparks · 30d00
Top themesr, documentation, llm tooling, package managementmicrobiome, graphical-models, bayesian-inference, cran-maintenance
Last editorial update3d ago1h ago
WebsiteVisit →Visit →

What is rdocdump?

rdocdump grew from a CRAN doc dumper into a resolver that pulls packages from anywhere

rdocdump flattens an R package's documentation and source into plain text, a shape aimed squarely at feeding code and docs to language models. It reached CRAN in June 2025 handling CRAN packages only. Within a year it accepted GitHub, GitLab and Bitbucket references with branch, tag and commit pinning, and 0.3.0 in May 2026 moved resolution onto pak.

Read the full rdocdump trajectory →

What is rgm?

A microbiome network model that got itself un-archived by deleting the dependency that killed it.

rgm implements the random graphical model for microbiome interactions across related environments, published in JABES in 2026. The package was archived from CRAN in February 2026 because of its dependency on huge; the recovery release drops that dependency entirely, which cost it the graphical-lasso warm start that used to seed the initial graph — the default is now an empty graph, with warm starts left to the user. A post-processing function returning ggplot diagnostics arrived in the same release.

Read the full rgm trajectory →

rdocdump vs rgm: editorial side-by-side

R
rdocdump
INFRA · APIS
0.0

rdocdump grew from a CRAN doc dumper into a resolver that pulls packages from anywhere

◆ Current state

rdocdump flattens an R package's documentation and source into plain text, a shape aimed squarely at feeding code and docs to language models. It reached CRAN in June 2025 handling CRAN packages only. Within a year it accepted GitHub, GitLab and Bitbucket references with branch, tag and commit pinning, and 0.3.0 in May 2026 moved resolution onto pak.

◆ Where it's heading

The direction is to stop caring where a package lives. 0.2.0 opened remote repository references and direct URLs; 0.3.0 swapped remotes for pak, added auto-discovery of packages in subdirectories, broadened URL format support to Bioconductor and GitLab, and added git clone as an automatic fallback when resolution fails. Cross-platform handling moved to internal tar operations.

◆ Prediction

With resolution generalized, remaining work is likely on output shaping — what gets included and how it is chunked — rather than on more sources. The entries do not say whether the text output format itself is stable.

R
rgm
INFRA · APIS
0.0

A microbiome network model that got itself un-archived by deleting the dependency that killed it.

◆ Current state

rgm implements the random graphical model for microbiome interactions across related environments, published in JABES in 2026. The package was archived from CRAN in February 2026 because of its dependency on huge; the recovery release drops that dependency entirely, which cost it the graphical-lasso warm start that used to seed the initial graph — the default is now an empty graph, with warm starts left to the user. A post-processing function returning ggplot diagnostics arrived in the same release.

◆ Where it's heading

Three tags shipped inside two hours on one day, and the notes are candid about why: 1.1.0 held the actual work but was never released, 1.2.0 restated it under a higher version to signal the size of the change, and 1.2.1 answered CRAN pre-test feedback. Beyond the archival recovery, the visible work is housekeeping that had accumulated — a shadowed rmvnorm() definition, roxygen import tags that were silently emitting nothing, leftover C++ template scaffolding, and build artifacts under version control. The diagnostics function is the only genuinely new user-facing capability in the window.

◆ Prediction

The immediate task was restoring availability, and that is done; the open question the entries raise is whether losing the graphical-lasso warm start affects convergence in practice, which the new diagnostic plots are positioned to answer.

Alternatives to rdocdump and rgm

Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either rdocdump or rgm.

See all rdocdump alternatives → · See all rgm alternatives →

Recent activity from rdocdump and rgm

Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.

  1. 2mo agordocdumpResolution moves to pak, with git clone fallback and subdirectory discovery
  2. 3mo agorgmJournal DOI replaces the preprint; promotional wording removed
  3. 3mo agorgmBack on CRAN after dropping the dependency that caused archival
  4. 3mo agorgmUnreleased twin of the CRAN recovery release
  5. 3mo agordocdumpGitHub, GitLab and Bitbucket sources with branch/tag/commit pinning
  6. 0y agordocdumpversion argument pins which CRAN release to process
  7. 1y agordocdumpInitial CRAN release with R documentation and source parsing
  8. 1y agordocdumpProof-of-concept development version
  9. 2y agorgmFirst release: simulation, estimation and post-processing

Frequently asked questions

What is the difference between rdocdump and rgm?

They serve adjacent needs but don't currently overlap on shipped themes. rdocdump and rgm are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.

Is rdocdump better than rgm?

Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. rdocdump and rgm are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.

What are the best alternatives to rdocdump?

Top rdocdump alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "rdocdump alternatives" section above for the current picks, or visit /alternatives/rdocdump for the full list with editorial commentary on each.

What are the best alternatives to rgm?

Top rgm alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "rgm alternatives" section above for the current picks, or visit /alternatives/rgm for the full list with editorial commentary on each.