qqman
The Manhattan-plot package for GWAS results, finished and dormant since 2017.
Comparison · Analytics
quantities vs treespace
A side-by-side editorial comparison of quantities and treespace — release velocity, themes, recent moves, and the top alternatives to consider.
quantities vs treespace: at a glance
What is quantities?
The glue package that makes R carry units and uncertainty through the same calculation.
quantities combines the units and errors packages into one class so values keep both their measurement units and their uncertainty through arithmetic, subsetting and data frame operations. Recent releases have been narrow: fixes to the covariance and correlation implementations, and performance work on the data.frame methods. Most of the release traffic is coordination with its two parent packages.
What is treespace?
treespace ships once every year or two, and only when CRAN or a user forces it.
treespace explores and compares sets of phylogenetic and transmission trees, including the tree-distance measures used in outbreak reconstruction. Its release history is entirely reactive: five updates across five years, each triggered by a CRAN policy change, an upstream package removal, or a bug someone reported. The most recent is an Rd cross-reference format patch plus a maintainer email change.
quantities vs treespace: editorial side-by-side
quantities
0.0ANALYTICS
The glue package that makes R carry units and uncertainty through the same calculation.
◆ Current state
quantities combines the units and errors packages into one class so values keep both their measurement units and their uncertainty through arithmetic, subsetting and data frame operations. Recent releases have been narrow: fixes to the covariance and correlation implementations, and performance work on the data.frame methods. Most of the release traffic is coordination with its two parent packages.
◆ Where it's heading
The design settled with 0.2.0, which made uncertainty unit-aware and added correlation and covariance support for quantities objects. Since then the package behaves like the integration layer it is — releasing when units, errors, dplyr or ggplot2 shift underneath it rather than on its own schedule. Several releases consist only of test repairs against upstream changes.
◆ Prediction
Expect the next release to follow a units or errors change rather than introduce new behaviour of its own.
treespace
0.0ANALYTICS
treespace ships once every year or two, and only when CRAN or a user forces it.
◆ Current state
treespace explores and compares sets of phylogenetic and transmission trees, including the tree-distance measures used in outbreak reconstruction. Its release history is entirely reactive: five updates across five years, each triggered by a CRAN policy change, an upstream package removal, or a bug someone reported. The most recent is an Rd cross-reference format patch plus a maintainer email change.
◆ Where it's heading
The package is stable and lightly staffed rather than abandoned — bugs that affect correctness do get fixed, and CRAN deadlines are met. But the 2023 update is the telling one: rather than vendor or replace adephylo when it faced removal, the maintainers disabled two tree-vector methods and marked the loss as hopefully temporary. Two years on, nothing in the feed indicates they came back.
◆ Prediction
The next entry will most likely be another CRAN-compliance patch, on the pattern of four of the last five releases. Whether the Abouheif and sumDD methods ever return is not something these entries give any signal on.
Alternatives to quantities and treespace
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either quantities or treespace.
constants
The R package for CODATA constants rebuilt its symbol table on NIST's naming so future updates stop being hand work.
austraits
The R client for AusTraits spends its releases chasing the dataset it reads.
ggdemetra
A ggplot2 layer for seasonal adjustment output, filling in one plot type at a time.
fossilsim
A fossil-record simulator that quietly grew a trait-evolution engine.
tern.rbmi
Reference-based multiple imputation tables, shipping only what CRAN checks demand.
See all quantities alternatives → · See all treespace alternatives →
Recent activity from quantities and treespace
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 11mo agotreespacetreespace patches Rd cross-references for CRAN
- 1y agoquantitiesFixes covariance and correlation implementations
- 2y agoquantitiesFaster data.frame methods
- 2y agotreespacetreespace disables Abouheif and sumDD as adephylo exits CRAN
- 3y agoquantitiesTest fixes for an upstream units change
- 3y agotreespacetreespace fixes vignette build on NA tree names
- 3y agoquantitiesUncertainty becomes unit-aware; adds correlation support
- 5y agotreespacetreespace fixes dist indexing that broke its tests
- 5y agoquantitiesCompatibility fix for units 0.7-0
- 5y agotreespacetreespace corrects tip label handling in transmission distances
- 6y agoquantitiesFixes uncertainty propagation for offset unit conversions
Frequently asked questions
What is the difference between quantities and treespace?
They serve adjacent needs but don't currently overlap on shipped themes. quantities and treespace are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is quantities better than treespace?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. quantities and treespace are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to quantities?
Top quantities alternatives in Analytics are ranked by recent ship velocity. Browse the "quantities alternatives" section above for the current picks, or visit /alternatives/quantities for the full list with editorial commentary on each.
What are the best alternatives to treespace?
Top treespace alternatives in Analytics are ranked by recent ship velocity. Browse the "treespace alternatives" section above for the current picks, or visit /alternatives/treespace-r for the full list with editorial commentary on each.