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Comparison · Infra & APIs
profileCI vs rgm
A side-by-side editorial comparison of profileCI and rgm — release velocity, themes, recent moves, and the top alternatives to consider.
Shared themes:r-package
profileCI vs rgm: at a glance
What is profileCI?
Profile-likelihood confidence intervals for any fitted model, in a feed that publishes out of order.
profileCI computes confidence intervals from the profile log-likelihood for user-supplied fitted models, generalising what confint.glm does for GLMs to any model object exposing a log-likelihood. The releases handle the awkward cases that make profiling fail in practice: infinite limits when the profile never drops below the interval threshold, bounded profiling ranges, and interpolation that breaks down near the limits. Only convex log-likelihoods are supported, so disjoint intervals are out of scope by design.
What is rgm?
A microbiome network model that got itself un-archived by deleting the dependency that killed it.
rgm implements the random graphical model for microbiome interactions across related environments, published in JABES in 2026. The package was archived from CRAN in February 2026 because of its dependency on huge; the recovery release drops that dependency entirely, which cost it the graphical-lasso warm start that used to seed the initial graph — the default is now an empty graph, with warm starts left to the user. A post-processing function returning ggplot diagnostics arrived in the same release.
profileCI vs rgm: editorial side-by-side
profileCI
0.0INFRA · APIS
Profile-likelihood confidence intervals for any fitted model, in a feed that publishes out of order.
◆ Current state
profileCI computes confidence intervals from the profile log-likelihood for user-supplied fitted models, generalising what confint.glm does for GLMs to any model object exposing a log-likelihood. The releases handle the awkward cases that make profiling fail in practice: infinite limits when the profile never drops below the interval threshold, bounded profiling ranges, and interpolation that breaks down near the limits. Only convex log-likelihoods are supported, so disjoint intervals are out of scope by design.
◆ Where it's heading
Work is concentrated on numerical reliability rather than scope: 1.1.1 replaced quadratic with monotonic cubic spline interpolation because the quadratic form could fail, and corrected parameter values stored near the confidence limits. The feed publishes these out of order, with the v1.0.0 entry stamped six months after v1.1.0 and carrying the package's full description rather than a changelog, so release order should be read from the version numbers rather than the dates. The same maintainer's revdbayes has been in pure maintenance across this period, which places profileCI as the more active project.
◆ Prediction
Expect further robustness work at the profiling limits and more logLikFn methods for common model classes, following the nls method added in 1.1.0.
rgm
0.0INFRA · APIS
A microbiome network model that got itself un-archived by deleting the dependency that killed it.
◆ Current state
rgm implements the random graphical model for microbiome interactions across related environments, published in JABES in 2026. The package was archived from CRAN in February 2026 because of its dependency on huge; the recovery release drops that dependency entirely, which cost it the graphical-lasso warm start that used to seed the initial graph — the default is now an empty graph, with warm starts left to the user. A post-processing function returning ggplot diagnostics arrived in the same release.
◆ Where it's heading
Three tags shipped inside two hours on one day, and the notes are candid about why: 1.1.0 held the actual work but was never released, 1.2.0 restated it under a higher version to signal the size of the change, and 1.2.1 answered CRAN pre-test feedback. Beyond the archival recovery, the visible work is housekeeping that had accumulated — a shadowed rmvnorm() definition, roxygen import tags that were silently emitting nothing, leftover C++ template scaffolding, and build artifacts under version control. The diagnostics function is the only genuinely new user-facing capability in the window.
◆ Prediction
The immediate task was restoring availability, and that is done; the open question the entries raise is whether losing the graphical-lasso warm start affects convergence in practice, which the new diagnostic plots are positioned to answer.
Alternatives to profileCI and rgm
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either profileCI or rgm.
WPML
WPML made machine translation the default, and its point releases keep chasing WordPress and page builders.
forestploter
A forest plot package that keeps handing users control of one more graphical detail.
ggInterval
Interval-valued data plotting, spending 2026 making its function names and examples survive CRAN.
contagionchannels
Three releases in ten days, every one of them a CRAN reviewer's correction rather than a code change.
tidyaudit
Pipeline provenance for tidyverse workflows, recording what changed at each step without keeping the data.
See all profileCI alternatives → · See all rgm alternatives →
Recent activity from profileCI and rgm
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 3mo agorgmJournal DOI replaces the preprint; promotional wording removed
- 3mo agorgmBack on CRAN after dropping the dependency that caused archival
- 3mo agorgmUnreleased twin of the CRAN recovery release
- 6mo agoprofileCICubic spline interpolation replaces a quadratic that could fail
- 7mo agoprofileCICRAN 1.0.0 release of profile-likelihood interval computation
- 1y agoprofileCIInfinite limits and bounded profiling ranges handled
- 2y agorgmFirst release: simulation, estimation and post-processing
Frequently asked questions
What is the difference between profileCI and rgm?
Both compete on the same themes — r-package — within Infra & APIs. profileCI and rgm are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is profileCI better than rgm?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. profileCI and rgm are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to profileCI?
Top profileCI alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "profileCI alternatives" section above for the current picks, or visit /alternatives/profileci for the full list with editorial commentary on each.
What are the best alternatives to rgm?
Top rgm alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "rgm alternatives" section above for the current picks, or visit /alternatives/rgm for the full list with editorial commentary on each.