pr2database
The protist reference database keeps widening past the rRNA gene it was built on.
Comparison · Infra & APIs
prioritizr vs smam
A side-by-side editorial comparison of prioritizr and smam — release velocity, themes, recent moves, and the top alternatives to consider.
prioritizr vs smam: at a glance
What is prioritizr?
Conservation planning absorbs the literature's target-setting rules as code.
prioritizr builds and solves systematic conservation planning problems, handing them to CBC, HiGHS, Gurobi or SYMPHONY. The last two years moved it onto the sf and terra spatial stack and rewrote its internals as R6 classes; the newest release adds a target-setting layer with seventeen named methods from the conservation literature, plus automatic penalty calibration. Solver control parameters and neighbour penalties arrive in the same release.
What is smam?
Animal-movement models in R, where new stochastic processes arrive years apart.
smam fits statistical models of animal movement, covering moving-resting processes with and without measurement error, moving-resting-handling, and moving-moving processes, with simulation, point estimation and variance estimation for each. The last three releases are pure upkeep: guarding Rf_error calls after an Rcpp update, a maintainer email change, and a compiler warning fix. The substantive work in this window is 0.7.0, which added estimate and vcov generics across all fit functions, and 0.6.0, which added the moving-moving process.
prioritizr vs smam: editorial side-by-side
prioritizr
0.0INFRA · APIS
Conservation planning absorbs the literature's target-setting rules as code.
◆ Current state
prioritizr builds and solves systematic conservation planning problems, handing them to CBC, HiGHS, Gurobi or SYMPHONY. The last two years moved it onto the sf and terra spatial stack and rewrote its internals as R6 classes; the newest release adds a target-setting layer with seventeen named methods from the conservation literature, plus automatic penalty calibration. Solver control parameters and neighbour penalties arrive in the same release.
◆ Where it's heading
The package keeps absorbing decisions that used to sit with the analyst. Targets were something you computed and passed in; now add_auto_targets() takes a method specification and the published rules from Jung, Rodrigues, Ward, Watson and Wilson are first-class objects. Penalty values were tuned by hand; calibrate_cohon_penalty() searches for them. The same instinct shows in exporting its validation helpers for other packages to vendor.
◆ Prediction
The deprecation of add_loglinear_targets() in favour of a spec function suggests the older manual target helpers are next to be folded into the same interface.
smam
0.0INFRA · APIS
Animal-movement models in R, where new stochastic processes arrive years apart.
◆ Current state
smam fits statistical models of animal movement, covering moving-resting processes with and without measurement error, moving-resting-handling, and moving-moving processes, with simulation, point estimation and variance estimation for each. The last three releases are pure upkeep: guarding Rf_error calls after an Rcpp update, a maintainer email change, and a compiler warning fix. The substantive work in this window is 0.7.0, which added estimate and vcov generics across all fit functions, and 0.6.0, which added the moving-moving process.
◆ Where it's heading
This package grows by adding process models, and it does so rarely. Between the moving-moving process in 2021 and now, the only interface-level change has been the 0.7.0 generics that gave every fit function a common way to retrieve estimates and their covariance, which is consolidation of an accumulated collection rather than expansion of it. The three releases since are entirely reactive to toolchain and CRAN pressure, and they arrive in step with the maintainer's other package coga, which received the same Rcpp guard within twenty minutes on the same day.
◆ Prediction
Expect further releases to be CRAN and Rcpp maintenance unless a new movement process is published, which is what has historically prompted a minor version here. The generics added in 0.7.0 give any future process model a ready-made interface to slot into.
Alternatives to prioritizr and smam
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either prioritizr or smam.
ggalign
Composable aligned layouts, rebuilt on S7 while ggplot2 4.0 lands underneath.
jSDM
Joint species distribution models in Gibbs-sampled C++, quiet since 2023.
rsofun
An ecosystem model starts tracking carbon isotopes and land-use change.
usmap
Ten years in, US mapping splits its data out and finally adds Puerto Rico.
trackeR
Fitness-tracking analysis in slow maintenance, still absorbing upstream breakage.
See all prioritizr alternatives → · See all smam alternatives →
Recent activity from prioritizr and smam
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 5mo agosmamRcpp attributes regenerated to guard Rf_error calls
- 9mo agoprioritizradd_auto_targets() brings 17 published target-setting methods ⚡
- 2y agoprioritizrDefault portfolio no longer shuffles the optimization problem
- 2y agosmamMaintainer email updated
- 2y agosmamCompiler format-security warning resolved
- 3y agosmamestimate and vcov generics unify all fit functions
- 3y agoprioritizrBoundary data rescaling reworked to avoid optimization artifacts
- 3y agoprioritizrMoves to sf and terra; internals rewritten as R6 classes ⚡
- 3y agoprioritizrmaptools, PBSmapping and rgeos dropped as dependencies
- 4y agoprioritizrVignette build fixes and lpsymphony remote setup
- 5y agosmamMoving-moving process added with simulation and estimation ⚡
- 5y agosmamVariance estimators adjusted; example dataset added
Frequently asked questions
What is the difference between prioritizr and smam?
They serve adjacent needs but don't currently overlap on shipped themes. prioritizr and smam are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is prioritizr better than smam?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. prioritizr and smam are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to prioritizr?
Top prioritizr alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "prioritizr alternatives" section above for the current picks, or visit /alternatives/prioritizr for the full list with editorial commentary on each.
What are the best alternatives to smam?
Top smam alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "smam alternatives" section above for the current picks, or visit /alternatives/smam for the full list with editorial commentary on each.