tibblify
tibblify learned to derive its own specs from OpenAPI, removing the step users disliked most
Comparison · Analytics
pedmut vs spsurvey
A side-by-side editorial comparison of pedmut and spsurvey — release velocity, themes, recent moves, and the top alternatives to consider.
pedmut vs spsurvey: at a glance
What is pedmut?
pedmut turns awkward mutation models into ones the likelihood engine can actually handle.
pedmut builds and transforms the mutation models used in pedigree likelihood calculations. Its recent arc is a toolkit of model transformations: makeReversible() with three methods, makeStationary() replacing the older stabilize(), adjustRate() for tuning overall mutation rate, and lumpMutSpecial() for lumping models that strong lumpability cannot handle. The most recent release is narrow, adding a programmatic output format to getParams().
What is spsurvey?
spsurvey has spent four years consolidating after its 5.0.0 rewrite rather than adding to it
spsurvey implements design and analysis for spatially balanced environmental survey samples, the GRTS methodology used in large-scale monitoring programs. The 5.0.0 rewrite is the defining event in its history, and everything in this window is aftercare. 5.6.0 in September 2025 finally removed the startup message warning users about that upgrade, several years on.
pedmut vs spsurvey: editorial side-by-side
pedmut
0.0ANALYTICS
pedmut turns awkward mutation models into ones the likelihood engine can actually handle.
◆ Current state
pedmut builds and transforms the mutation models used in pedigree likelihood calculations. Its recent arc is a toolkit of model transformations: makeReversible() with three methods, makeStationary() replacing the older stabilize(), adjustRate() for tuning overall mutation rate, and lumpMutSpecial() for lumping models that strong lumpability cannot handle. The most recent release is narrow, adding a programmatic output format to getParams().
◆ Where it's heading
The consistent goal is making models satisfy the mathematical properties downstream algorithms require. Reversibility, stationarity, and lumpability each unlock something in pedprobr, and the package keeps adding ways to coerce an arbitrary model into having them. lumpMutSpecial() is explicitly incomplete, described as covering only some cases with more possibly to follow, which sets up the main open thread.
◆ Prediction
Expect additional special lumping cases to be implemented, since the package documents the current coverage as partial and pedprobr's likelihood performance depends directly on it.
spsurvey
0.0ANALYTICS
spsurvey has spent four years consolidating after its 5.0.0 rewrite rather than adding to it
◆ Current state
spsurvey implements design and analysis for spatially balanced environmental survey samples, the GRTS methodology used in large-scale monitoring programs. The 5.0.0 rewrite is the defining event in its history, and everything in this window is aftercare. 5.6.0 in September 2025 finally removed the startup message warning users about that upgrade, several years on.
◆ Where it's heading
The direction is toward standard R idioms and away from bespoke ones. 5.4.0 introduced sp_frame and sp_design classes so plot() and summary() work directly, keeping sp_plot() and sp_summary() only for backwards compatibility; 5.5.0 moved warnings from cat() to message() so they can be suppressed normally, and added adjwgtNR() for non-response weight adjustment. Documentation is being pushed off CRAN onto the package website, with only the Start Here vignette remaining. Release cadence is slow — five releases across roughly four years.
◆ Prediction
With the migration messaging retired and the class system settled, further releases are likely to stay in maintenance and statistical-detail territory. Nothing in the entries suggests another rewrite.
Alternatives to pedmut and spsurvey
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either pedmut or spsurvey.
StreamCatTools
StreamCatTools is quietly moving off web services and onto cloud-native GeoParquet
reproducible
reproducible added a windowed read path so remote GeoTiffs never fully download
qcTAF
qcTAF is building an automated checklist for reproducible fisheries assessments, one criterion at a time
rpymat
After three dormant years, rpymat returned to fix the OpenMP crash that breaks R and conda together
ieegio
ieegio's first release lands electrode trajectory burning and a WebGL-free surface plot
See all pedmut alternatives → · See all spsurvey alternatives →
Recent activity from pedmut and spsurvey
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 2mo agopedmutgetParams() gains a programmatic output format
- 3mo agospsurveyExample and unit test updates
- 10mo agospsurvey5.0.0 migration warning retired; vignettes moved to the website
- 1y agopedmutSpecial lumping arrives for un-lumpable models
- 1y agopedmutReversibility transformations and rate adjustment
- 2y agospsurveyFixes for revisit_dsgn() panels and empty geometries in grts()/irs()
- 2y agopedmutMutation rate and boundedness diagnostics
- 3y agospsurveyadjwgtNR() for non-response weighting; messages moved to message()
- 3y agospsurveyCitation updated to Dumelle et al. (2023)
- 3y agopedmutPM stabilisation and multi-lump strong lumpability
- 3y agopedmutlumpedModel() wrapper and lumping speedups
- 3y agospsurveysp_frame and sp_design classes make plot() and summary() work directly
Frequently asked questions
What is the difference between pedmut and spsurvey?
They serve adjacent needs but don't currently overlap on shipped themes. pedmut and spsurvey are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is pedmut better than spsurvey?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. pedmut and spsurvey are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to pedmut?
Top pedmut alternatives in Analytics are ranked by recent ship velocity. Browse the "pedmut alternatives" section above for the current picks, or visit /alternatives/pedmut for the full list with editorial commentary on each.
What are the best alternatives to spsurvey?
Top spsurvey alternatives in Analytics are ranked by recent ship velocity. Browse the "spsurvey alternatives" section above for the current picks, or visit /alternatives/spsurvey for the full list with editorial commentary on each.