paleobuddy
paleobuddy can now simulate trait-dependent diversification, not just birth-death.
A side-by-side editorial comparison of paletteer and treespace — release velocity, themes, recent moves, and the top alternatives to consider.
A palette aggregator that grows by absorbing other packages, not by changing shape
paletteer collects colour palettes from across the R ecosystem behind one consistent interface, so users can reference any of them by a single name rather than installing each source package. Its function surface has been essentially fixed for years; what changes each release is the catalogue. Version 1.7.0 pulls in palettes from ButterflyColors, feathers, ggsci, khroma, PrettyCols, tayloRswift, blueycolors, amerika, Rdune and poisonfrogs, and tightens argument checking.
treespace ships once every year or two, and only when CRAN or a user forces it.
treespace explores and compares sets of phylogenetic and transmission trees, including the tree-distance measures used in outbreak reconstruction. Its release history is entirely reactive: five updates across five years, each triggered by a CRAN policy change, an upstream package removal, or a bug someone reported. The most recent is an Rd cross-reference format patch plus a maintainer email change.
paletteer collects colour palettes from across the R ecosystem behind one consistent interface, so users can reference any of them by a single name rather than installing each source package. Its function surface has been essentially fixed for years; what changes each release is the catalogue. Version 1.7.0 pulls in palettes from ButterflyColors, feathers, ggsci, khroma, PrettyCols, tayloRswift, blueycolors, amerika, Rdune and poisonfrogs, and tightens argument checking.
This is a catalogue, and catalogues grow by ingestion. Every substantive release since 1.3.0 is a list of source packages absorbed, in batches of tens to low hundreds of palettes, with occasional maintenance on the metadata tables that describe them. Release cadence follows contributor pull requests rather than any internal roadmap — roughly one release every one to two years, each bundling whatever accumulated.
Expect the same: another release when enough new source packages have been proposed, likely paired with further work on palettes_c_names and palettes_d_names, the only part of the package that has been iterated on for its own sake.
treespace explores and compares sets of phylogenetic and transmission trees, including the tree-distance measures used in outbreak reconstruction. Its release history is entirely reactive: five updates across five years, each triggered by a CRAN policy change, an upstream package removal, or a bug someone reported. The most recent is an Rd cross-reference format patch plus a maintainer email change.
The package is stable and lightly staffed rather than abandoned — bugs that affect correctness do get fixed, and CRAN deadlines are met. But the 2023 update is the telling one: rather than vendor or replace adephylo when it faced removal, the maintainers disabled two tree-vector methods and marked the loss as hopefully temporary. Two years on, nothing in the feed indicates they came back.
The next entry will most likely be another CRAN-compliance patch, on the pattern of four of the last five releases. Whether the Abouheif and sumDD methods ever return is not something these entries give any signal on.
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either paletteer or treespace.
paleobuddy can now simulate trait-dependent diversification, not just birth-death.
geodist stays dependency-free and fast, and warns you when 'cheap' distances stop being honest.
errors keeps making uncertainty print the way each scientific field expects.
CMAQ went global in v5.5, and has been patching that surface ever since.
enpls has not changed its statistics since 2016 — only its website, twice.
grex is a lookup table with a version number — it ships when the annotation moves.
See all paletteer alternatives → · See all treespace alternatives →
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
They serve adjacent needs but don't currently overlap on shipped themes. paletteer and treespace are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. paletteer and treespace are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
Top paletteer alternatives in Analytics are ranked by recent ship velocity. Browse the "paletteer alternatives" section above for the current picks, or visit /alternatives/paletteer-r for the full list with editorial commentary on each.
Top treespace alternatives in Analytics are ranked by recent ship velocity. Browse the "treespace alternatives" section above for the current picks, or visit /alternatives/treespace-r for the full list with editorial commentary on each.