simlandr
Potential landscape tooling settling onto standard R generics after two rounds of renaming.
Comparison · Analytics
nmar vs STACAS
A side-by-side editorial comparison of nmar and STACAS — release velocity, themes, recent moves, and the top alternatives to consider.
nmar vs STACAS: at a glance
What is nmar?
NMAR landed on CRAN with two nonresponse estimators behind one interface, then started tuning it.
Three releases in seven weeks, starting from nothing. The initial CRAN release implements empirical likelihood (Qin, Leung and Shao 2002) and both parametric and nonparametric exponential tilting (Riddles, Kim and Im 2016) for estimating means under nonignorable nonresponse, all reachable through a single nmar() call with formula syntax and direct support for survey.design objects. Since then the work has been operational: a configurable bootstrap backend and stricter input validation.
What is STACAS?
Single-cell batch correction that learned to use cell labels, then spent three releases chasing Seurat.
STACAS integrates single-cell RNA-seq datasets by finding and weighting anchors between them, with rPCA-distance-based downweighting and an optional semi-supervised mode that uses cell type labels to discard inconsistent anchors. IntegrateData.STACAS() performs the integration natively rather than handing off, and StandardizeGeneSymbols() normalises gene naming across datasets before anchors are computed.
nmar vs STACAS: editorial side-by-side
nmar
0.0ANALYTICS
NMAR landed on CRAN with two nonresponse estimators behind one interface, then started tuning it.
◆ Current state
Three releases in seven weeks, starting from nothing. The initial CRAN release implements empirical likelihood (Qin, Leung and Shao 2002) and both parametric and nonparametric exponential tilting (Riddles, Kim and Im 2016) for estimating means under nonignorable nonresponse, all reachable through a single nmar() call with formula syntax and direct support for survey.design objects. Since then the work has been operational: a configurable bootstrap backend and stricter input validation.
◆ Where it's heading
The package is positioning itself as the general interface to nonignorable-nonresponse estimation rather than a reference implementation of one paper — shared architecture across engines, one formula API, and integration with the survey package so weights and stratification come for free. The follow-up releases suggest the next constraint is compute: bootstrap variance estimation is the expensive part, and it now dispatches to future.apply when a parallel plan exists.
◆ Prediction
Expect further engines under the same nmar() interface or wider bootstrap support, since the architecture was explicitly refactored to share structure across estimators.
STACAS
0.0ANALYTICS
Single-cell batch correction that learned to use cell labels, then spent three releases chasing Seurat.
◆ Current state
STACAS integrates single-cell RNA-seq datasets by finding and weighting anchors between them, with rPCA-distance-based downweighting and an optional semi-supervised mode that uses cell type labels to discard inconsistent anchors. IntegrateData.STACAS() performs the integration natively rather than handing off, and StandardizeGeneSymbols() normalises gene naming across datasets before anchors are computed.
◆ Where it's heading
The method work concentrated in version 2.0 and has been stable since; everything after is Seurat compatibility and operational robustness. Versions 2.1.1 through 2.3.0 track Seurat v5 assays, v3-to-v5 conversion, multi-layer objects and SCT normalisation, with the genuinely useful additions — a reference seed dataset, max.seed.datasets for large-scale integration, min.sample.size — arriving as side effects of that work. The package is from the same lab as GeneNMF, and its release rhythm follows the single-cell ecosystem's upstream churn rather than an internal roadmap.
◆ Prediction
Expect the next release to follow further Seurat object-model changes, which have driven the last three. Nothing in the entries indicates new anchor-scoring or correction methodology in progress.
Alternatives to nmar and STACAS
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either nmar or STACAS.
lavaanExtra
SEM reporting helpers converging on APA output, one CRAN resubmission at a time.
ibis.iSDM
A raster-to-terra migration is the only readable change in a feed of merge notes.
anyflights
A nycflights13 generator whose recent work is all about the data being right.
vinereg
Conditional density and log-likelihood fill out a vine copula regression package.
stringx
A drop-in string API for base R, kept alive by upstream check failures.
Recent activity from nmar and STACAS
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 6mo agonmarBootstrap backend now parallel-aware and configurable
- 7mo agonmarCRAN submission fixes and DOI references
- 8mo agonmarNMAR 0.1.0 ⚡
- 1y agoSTACASMulti-layer objects and Seurat v3-to-v5 conversion handled
- 2y agoSTACASscale.data option for extreme batch effects; gene name conversion table
- 3y agoSTACASReference seeding, gene symbol standardisation, large-scale integration path
- 4y agoSTACASSemi-supervised integration and rPCA anchor downweighting ⚡
- 5y agoSTACASSeurat 4.0.0 compatibility and SCTransform support
Frequently asked questions
What is the difference between nmar and STACAS?
They serve adjacent needs but don't currently overlap on shipped themes. nmar and STACAS are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is nmar better than STACAS?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. nmar and STACAS are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to nmar?
Top nmar alternatives in Analytics are ranked by recent ship velocity. Browse the "nmar alternatives" section above for the current picks, or visit /alternatives/nmar for the full list with editorial commentary on each.
What are the best alternatives to STACAS?
Top STACAS alternatives in Analytics are ranked by recent ship velocity. Browse the "STACAS alternatives" section above for the current picks, or visit /alternatives/stacas for the full list with editorial commentary on each.